Gene Namu_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1718 
Symbol 
ID8447320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1882947 
End bp1883900 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content74% 
IMG OID645040844 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003201097 
Protein GI258651941 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00760825 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.13542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGC GATATGACGT AGTGGTGGTC GGCGGGGGCG CCGCCGGCCT GAACGGTGCC 
CTGATGCTGG GTCGGTCCCG GCGATCGGTG CTGGTGGTCG ACGCCGGTGA ACCCCGCAAC
GCACCGGCGG CGGCCATCCA CGGCCTGCTC GGCCGGGAGG GGATGGCCCC GGCCGACCTG
CTGGCCCGCG GCCGGGCCGA GGTGGCTGGA TACGGCGTCA CCTTGGCCAC CGGGTCGGTG
ACCGACATCA GCCGGGAGCA TGAGGGCTTC GTGGTCCGAT GCAGCGATGC CCGCTCGGTG
GCGGCCCGCC GGCTGCTGAT CACCACCGGG GTCGTGGACG AGCTGCCCGA GATCGACGGT
CTGCGTGCGC AGTGGGGCAC CGGAGTGCTG CACTGCCCGT ACTGCCACGG CTGGGAGGCG
CGGGACCAGG CCATCGGCGT GCTGGCCACC GGCCCGATGT CGATCCATCA GGCCCTGCTG
TTCCGCCAGC TCAGCGACGA CGTGGTGTTC TTCACCCATG GGTCCGACCC GACACCGGAA
AGCCGGGACA CCCTGGCGGC GGTCGGGATC GGCGTCGTCG ACGGGACGGT CGCTGCGGTC
GAGGCGGCGG ACGGCCGAGT GAGCGGCGTC CGGCTCGGCG ACGGCACCGT GGTGGCCCGG
AAGCACCTGG TGGTGGCCAG CCGCCCGGTG GCCCGGGCCG ACTTCCTGCG TGGGCTGGGC
TTGGAGCTGG TCGAGCACCC GTCGGGCGCC GGCCAGCACC TGCCGGTGGA TGGGATGGGA
CGCACCGAGG CCGCCGGGGT GTGGGCGGCC GGCAACGTGA CCGAACCGTT CGCCCAGGTC
GGCGCGGACG CGGCGGCCGG CGCGTTCGCC GCGGCGCAGA TCAACGCGGA TCTGGTCTTC
GAACAGACCC GGCTCGCCGT CGCGGCCGCC CGGACCGAGC CCGCCCACCA CTAA
 
Protein sequence
MDERYDVVVV GGGAAGLNGA LMLGRSRRSV LVVDAGEPRN APAAAIHGLL GREGMAPADL 
LARGRAEVAG YGVTLATGSV TDISREHEGF VVRCSDARSV AARRLLITTG VVDELPEIDG
LRAQWGTGVL HCPYCHGWEA RDQAIGVLAT GPMSIHQALL FRQLSDDVVF FTHGSDPTPE
SRDTLAAVGI GVVDGTVAAV EAADGRVSGV RLGDGTVVAR KHLVVASRPV ARADFLRGLG
LELVEHPSGA GQHLPVDGMG RTEAAGVWAA GNVTEPFAQV GADAAAGAFA AAQINADLVF
EQTRLAVAAA RTEPAHH