Gene Namu_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1680 
Symbol 
ID8447280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1845776 
End bp1846342 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content71% 
IMG OID645040804 
Productprotein of unknown function DUF1003 
Protein accessionYP_003201059 
Protein GI258651903 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000539657 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.503205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAT CACCGACCCG GCGCCGGTTG GACCAGCCGC GCAGCAGCCG CCGGTTCTCC 
ATGGAGATCG ACCCGGAGAC CTTCGGCCGG CTCTCCGAAC GGCTGGCCCG GTTCCTGGGC
ACCGGCACGT TCCTGTTCTG GCAGACCCTG GTGGTGATCA TCTGGATCGC GCTGAACCTG
TTCGCGGTCA GCTACCAGTG GGACCCCTAC CCGTTCATCC TGCTCAACCT GGCCTTTTCC
ACGCAGGCCG CCTACGCGGC GCCGCTGATC CTGCTGGCCC AGAACCGGCA GGACGACCGG
GACCGGATCT CGCTGGAGGA GGACCGCTCG CGCGCCGCGC AGACCAAGGA GGACACCGAG
TTCATCGCCC GTGAGCTGGC CGCCCTGCGG GTGGCCATCG GTGAGGTCGC CACCCGGGAT
TACCTGCGCG GCGAGCTGGA ACGGCTCCGG GAGGACCTGG AGGAGCCCGA GCGCGGCGAT
CCGCCGCGGG ACAAGACCGG CAAGCGGCCG GACAAGCGCA AGAGCCGGCC CAAGCCCCCT
GGGGAGCGGG CCGAGCCGCC GGCCTGA
 
Protein sequence
MAESPTRRRL DQPRSSRRFS MEIDPETFGR LSERLARFLG TGTFLFWQTL VVIIWIALNL 
FAVSYQWDPY PFILLNLAFS TQAAYAAPLI LLAQNRQDDR DRISLEEDRS RAAQTKEDTE
FIARELAALR VAIGEVATRD YLRGELERLR EDLEEPERGD PPRDKTGKRP DKRKSRPKPP
GERAEPPA