Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1680 |
Symbol | |
ID | 8447280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1845776 |
End bp | 1846342 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645040804 |
Product | protein of unknown function DUF1003 |
Protein accession | YP_003201059 |
Protein GI | 258651903 |
COG category | [S] Function unknown |
COG ID | [COG4420] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.000539657 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.503205 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAT CACCGACCCG GCGCCGGTTG GACCAGCCGC GCAGCAGCCG CCGGTTCTCC ATGGAGATCG ACCCGGAGAC CTTCGGCCGG CTCTCCGAAC GGCTGGCCCG GTTCCTGGGC ACCGGCACGT TCCTGTTCTG GCAGACCCTG GTGGTGATCA TCTGGATCGC GCTGAACCTG TTCGCGGTCA GCTACCAGTG GGACCCCTAC CCGTTCATCC TGCTCAACCT GGCCTTTTCC ACGCAGGCCG CCTACGCGGC GCCGCTGATC CTGCTGGCCC AGAACCGGCA GGACGACCGG GACCGGATCT CGCTGGAGGA GGACCGCTCG CGCGCCGCGC AGACCAAGGA GGACACCGAG TTCATCGCCC GTGAGCTGGC CGCCCTGCGG GTGGCCATCG GTGAGGTCGC CACCCGGGAT TACCTGCGCG GCGAGCTGGA ACGGCTCCGG GAGGACCTGG AGGAGCCCGA GCGCGGCGAT CCGCCGCGGG ACAAGACCGG CAAGCGGCCG GACAAGCGCA AGAGCCGGCC CAAGCCCCCT GGGGAGCGGG CCGAGCCGCC GGCCTGA
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Protein sequence | MAESPTRRRL DQPRSSRRFS MEIDPETFGR LSERLARFLG TGTFLFWQTL VVIIWIALNL FAVSYQWDPY PFILLNLAFS TQAAYAAPLI LLAQNRQDDR DRISLEEDRS RAAQTKEDTE FIARELAALR VAIGEVATRD YLRGELERLR EDLEEPERGD PPRDKTGKRP DKRKSRPKPP GERAEPPA
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