| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1656 |
|---|
| Symbol | |
|---|
| ID | 8447255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 1822090 |
|---|
| End bp | 1822911 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 645040779 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003201035 |
|---|
| Protein GI | 258651879 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0328818 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATG AGGCGCTGGT CGCGCTGGCC GCCCCGCCCG AGGCGGCCGG CGCGGTCCGG
ACGATGATCG GCTACCGGAT GGCCGCCGAG CCCGGTGAGC ATCGCGGCCT GCCCAGCCCC
TACCTGACCC TGGTGTTCTC GCTGTCCGGG CCGCTGCCGA TCCACGTCCC GTCCCCCGCG
GGCCGGCGGG AGGGCGCGTT CCGGATCCCG TTGGGCGGCC TGCACACCCG GGCCGTGCTG
TTGCCCCGCC GGCTCCCGCA CGCCCCGACC TCCGCTCAAC GCGGCATCCA GTTGGCCGTG
CATCCGCTCG CCGCCCGGGC CGTCTTCGGG GTGCCGGCCG CGGCGCTCAC CGACGAGGTG
CTCGAGGTCG GGGACGTCGT CGGCCCGCTG GCCGGGCTGA CGGAGCGGCT GGCCGCGGAT
CCGACCGGGC CGGACGCGGT GGCCGCGGTC AACGGGTGGC TGCGCGAGCG CACCCGGGCC
GCCGCGGCCT CACCCGCCCC GCGGGAGCTG GCCCGCGCCT GGCGGCTCAT CGTGGGCAGC
GACGGCCGGG CCCGGATCGG CGACGTCGCC CGCGACGTCG GTTGGTCGCG GGCCCACCTG
ACCCGGCGGC TGCGCGCGGA GATCGGCGTC GGCGCCAAGG ATCTCGCCCG GCTGGCCCGG
TTCCAGCGAT CCCGCCGGCT GATGATCGGT CGGGCCGGGG AGCTCGGCCG GATCGCGCAG
GACAGTGGCT ACGCCGACCA GTCCCACCTG ACCGCGGAGT GGCGGGAGTT CGCCGGCTGC
ACCCCGCGGC AATGGATGGC CGCCGAGCTG GCCGACCACT GA
|
|---|
| Protein sequence | MADEALVALA APPEAAGAVR TMIGYRMAAE PGEHRGLPSP YLTLVFSLSG PLPIHVPSPA
GRREGAFRIP LGGLHTRAVL LPRRLPHAPT SAQRGIQLAV HPLAARAVFG VPAAALTDEV
LEVGDVVGPL AGLTERLAAD PTGPDAVAAV NGWLRERTRA AAASPAPREL ARAWRLIVGS
DGRARIGDVA RDVGWSRAHL TRRLRAEIGV GAKDLARLAR FQRSRRLMIG RAGELGRIAQ
DSGYADQSHL TAEWREFAGC TPRQWMAAEL ADH
|
|---|
| |