| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1649 |
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| Symbol | |
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| ID | 8447248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 1815467 |
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| End bp | 1816402 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645040772 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003201028 |
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| Protein GI | 258651872 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.2409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00110779 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCCGG CGCTGCTCGG CGGGATCCTC GGCGCGCTGG CCGCGGCCGG CCTGCTGATG
GCGATCCTGG CCACCCCGCC GCTGCGCCGG CCGACCCTGT CCGACCGCAT CGCCCCCTAC
GTCGCCGACG CCGGCGGCCA GTCCCGCCTG CTCGCCGGGT CCGCGCCCGG CCCGCGCAGC
ACCCTCGGCC GGCTGGCCGC GCCGCTGCTG CGCGACGCCG TCCGCTTCGT CGACAAGATC
ATGGGCGGGC GCGGCTCGGT GGAGCGACGG CTCACCGCCA TCAGCTCGCC ACTGACCGTC
GACCAGTTCC GGATCGAACA GGTCGTGTGG GGCTCCCTCG GCGCCGCCGC CGGCGCCGGC
ATCGGGCTGC TCGCCGTCGT CCTGGGCCAG TCCAACCCGT TCATCCTGCT GCTGCTGATC
GTCGTCTCGG CCGCCGCCGG CGTCCTGGGC CGCGACTGGT GGCTCACCCA GGCGGTCAGC
AAACAGGAAG AGGAGATCAT CGCCGAGTTC CCGGTGATCG CCGAGATGCT CGCGCTGTCG
GTCACCGCCG GCGAAAGCCC GACCGGCGCG TTGGACCGGG TCACCAAGCT CGCGCACGGT
CCCCTGGTCA GCCAGCTCAG CGGCGTCCTC GCCGAAACCC GGGCCGGCAC CCCGTTCCTG
ACCGCCCTGA CCCACCTGCG GGACCGCACC CGGCTCGAGC CGCTGGCCCG GTTCCTGGAC
GGGATGGCCG TCGCCATCGA GCGCGGCACC CCGCTGGCCG ACGTGCTCCG CGCGCAGGCG
GCCGACGTCC GCGCCCTGTC GAAACGGCAA TTGCTCGAAT CCGGCGGCCG TAAAGAAATC
GCCATGATGG TGCCCGTCGT TTTCCTGGTG CTGCCGATCA CCATTCTTTT CGCCCTCTAC
CCCGGACTGC TGGCCATCAC GACGGTGGCC CAGTGA
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| Protein sequence | MSPALLGGIL GALAAAGLLM AILATPPLRR PTLSDRIAPY VADAGGQSRL LAGSAPGPRS
TLGRLAAPLL RDAVRFVDKI MGGRGSVERR LTAISSPLTV DQFRIEQVVW GSLGAAAGAG
IGLLAVVLGQ SNPFILLLLI VVSAAAGVLG RDWWLTQAVS KQEEEIIAEF PVIAEMLALS
VTAGESPTGA LDRVTKLAHG PLVSQLSGVL AETRAGTPFL TALTHLRDRT RLEPLARFLD
GMAVAIERGT PLADVLRAQA ADVRALSKRQ LLESGGRKEI AMMVPVVFLV LPITILFALY
PGLLAITTVA Q
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