| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1634 |
|---|
| Symbol | |
|---|
| ID | 8447233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 1800406 |
|---|
| End bp | 1801656 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645040758 |
|---|
| Product | transposase IS111A/IS1328/IS1533 |
|---|
| Protein accession | YP_003201014 |
|---|
| Protein GI | 258651858 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.320566 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0262189 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTCTG CCAGCAACAC CCTGCCCGAC CAAGCACCCC AAGACCTGAC CGCAGGCCTG
GACTGGGCCC GCGACGACCA CGCCGTGTCG ATCGTCAACG ACCGCGGCCG CGAGATTGCC
CGGCACACCA TCGAGCACAC CGCCGCCGGA CTGATCGAAC TCGTGGCCGT GCTCACCCGC
GCCGGCTGCC AGGAGGTCGC GATCGAACGC CCCGACGGGC CCGTGGTCGA CGCCCTTCTC
GGCGCCGGTG TGACCGTGGT CGTGATCAGC CCGAACCAGG TCAAGAACCT GCGTGGCCGG
TACGGCTCGG CCGGCAACAA GGACGACCGG TTCGACGCCT ACGTGCTCGC CGACACCCTG
CGCACCGACC GGTCCCGGCT GCGGCCACTG GTGCCCGACG CACCGGAAAC CGTCGCGCTG
CGCCGAATCG TCCGCGCTCG CCGCGATCTG GTCGCCCACC GCGTGGCCCT GGCCAACCAA
CTGCGCGCCC ACCTTCGCCT GGTCTTCCCC GGTGCGGTCG GCCTGTTCCG GCAGATCGAC
TCGCTGATCA CTCTGGCGTT CCTGACCCGT TTCCCGACCC AGGACAAAGC CGACTGGCTC
ACCCCGACCA GACTCGGCCG GTGGCTGTCC TCGGTCGGCT ACTCCGGACG CACCGACCCG
GCCGCGTTGC ACGCCCATCT GACCGCCGCA CCCCGCGGCG CCGCCGGCGA CCAGACGGCG
TACACCGCGA TCACCGCATC CTCCGTTGCC CTGCTCACCG CGATGGTTAC CCAGATCAAG
GCTCTGGAAG CCCAGATCAG CGCCCAGCTC GACGCGCACG CCGACCAACA CATCTTCACC
AGCCTGCCCC GCTCGGGCCG CGTCCGGGCC GCCCGGCTGC TCGCCGAGAT CGGCGACTGC
CGAGCCAAGT TCCCCACCCC GGAAGCGTTG ATCTGCCTGG CCGGTGTCGC CCCGTCCACC
CGCCAATCCG GAAAGATCCG CGTCGTGGCG TTCCGATGGG CCTGCGACAA ACAACTCCGC
GACGCCGTCT GCGACTTCGC CGGCGACTCG ATCAAGGCCA ACCCCTGGGC AGCCGATCTC
TACCGAAGAG CCAGAGCACG AGGTCACGAC CACCCCCACG CCGTCCGGGT CCTGGCCCGT
GCCTGGCTGA CCGTCATCTG GCACTGCTGG CAGGACGGCG TGCGCTACGA CCCGGCAGAA
CACCGGGCCC TGCAACGCCT CCTCAACCAA GATCAAAAAA GGGCGGCTTG A
|
|---|
| Protein sequence | MKSASNTLPD QAPQDLTAGL DWARDDHAVS IVNDRGREIA RHTIEHTAAG LIELVAVLTR
AGCQEVAIER PDGPVVDALL GAGVTVVVIS PNQVKNLRGR YGSAGNKDDR FDAYVLADTL
RTDRSRLRPL VPDAPETVAL RRIVRARRDL VAHRVALANQ LRAHLRLVFP GAVGLFRQID
SLITLAFLTR FPTQDKADWL TPTRLGRWLS SVGYSGRTDP AALHAHLTAA PRGAAGDQTA
YTAITASSVA LLTAMVTQIK ALEAQISAQL DAHADQHIFT SLPRSGRVRA ARLLAEIGDC
RAKFPTPEAL ICLAGVAPST RQSGKIRVVA FRWACDKQLR DAVCDFAGDS IKANPWAADL
YRRARARGHD HPHAVRVLAR AWLTVIWHCW QDGVRYDPAE HRALQRLLNQ DQKRAA
|
|---|
| |