| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1568 |
|---|
| Symbol | |
|---|
| ID | 8447166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 1727895 |
|---|
| End bp | 1730723 |
|---|
| Gene Length | 2829 bp |
|---|
| Protein Length | 942 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 645040695 |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_003200952 |
|---|
| Protein GI | 258651796 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2374] Predicted extracellular nuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.10217 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0647375 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCGGT TCCTGTCCCT GTCCCTGGCG CTGGCCGTGC TGGCCTCGGC GGTGCTGCCG
GGCACGGCCG GCGCGGCCGC GGCCGACCCG CCTGCGGTGT GGGTGAACGA GATCCACTAC
GACAACGCCG GGACCGACGT CGACGAGGCG ATCGAGGTGG CCGGGCCGGC CGGCACCGAC
CTGACCGGCT GGTCGCTGGT GCTCTACAAC GGCGATACGG CGACCGCCGC GATCCGGTAC
CGGACGCTGG CCCTGTCCGG GTCGCTGCCC GACCAGTCCG GCGGGTACGG CACCGCCTTC
GTCGCCGCCC CCGGCCTGCA GAACGGCGAC CGGGACGGGT TCGCGCTGGT CGACGCGGCC
GGCACGGTCG TGCAGCTGCT GTCCTACGAG GGCGTGTTCA CCGCGGCCGA CGGTCCGGCC
GCCGGGCGGT CCAGCACCGA CATCGGCATC GCCCAGAGCG GCGCGCCGGT CGGCAGCTCG
CTGCAGCTGA CCGGCACCGG CCGGGGCCCG GCCGACTTCA CCTGGGCCAG CGGGACGGCC
GGCTTCGGGC AGGTCAACGC CGGCCAGCAG TTCGCCGACC CGAACCCGCC GGCCGACGAA
TGCGGGGCCC CGGCCACCCC GATCGGCACC GTGCAGGGCT CGAGTGCGAC CACCGCGCTG
GCCGGCCAAC GGGTCTCGGT GCAGGCCGTG GTGACCGCGG TCGAACCCGG CCTGGGCGGC
TTCTACCTGC AGGACCCGGC CGGCGACGGG GACCCGGCCA CCGCCGACGG GCTGTTCGTC
TACGGTGGCT CGCCCACCCC GGCGGTCGGC GACGCCGTGC GCGTCACCGG CACCGCCGGC
GAGTACGTGA CCAGCTCCGG GGCCAGCTCG CAGACCCAGC TGTCCGGCTC CCCCACCGTT
GGGGTCTGCC AGTCCGGCCA GGCGCTGCCC GAGCCGGTCG CCGTGCAGTT CCCGCTGCCC
GCCGCCGACG CACTGGAGCC GCTGGAGGGC ATGCGGGTGT CCCTGCCGCA GACGCTGGTG
ATCAGCGAGT ACTTCAACTA CGACCGGTTC GGCGAGGTCG TGCTCGGCCT GCCGCTGGCC
GGGCAGTCGC GGCCGTTCAC GCCCACCGCG GTGGTCGACC CGGGGCCGCC GGCCGTCGAG
CTGGCCGCCC GCAATGCGCT GAGCCGGATC ACCCTGGACG ACGGGTCCAC CACCCAGAAC
CCGGCCGTGC TGCGGCATCC GGGCAACGGG CAGCCGTTCG GCTCGACCAA CTCCTTCCGC
GGCGGTGACA CCGTCACCGG GGTGACCGGG GTGCTCGACC AGACGTTCGG GGCATACCGG
GTGCAGCCGA CCGGGCCGGC CGACTACGCC GCGGTCAACC CGCGACCGGA CAGCCCGCCG
GCGGTCGGCG GCAGCACCCG GGTGGCCAGC CAGAACGTGC TGAACTACTT CCTCACCGTG
GACGACGGCA CCACCGCCGG GCGCATCTGC GGCCCGGCCC GCAACCAGGA ATGCCGGGGC
GCCGACAACG CCGACGAGCT GGCCCGGCAG CGGACCAAGA TCCTGGCCGC CCTGGGCGGG
CTGGACGCCG ATGTGGTCGG CCTGCTGGAA CTGGAGAACA CCCCCGGCGT CGACCCGGCC
GCCGACCTGG TCGCCGGCCT CAACGCCCGG CCCGGCGCCC AGCCGTACGC GAGCGTCGAC
ACCGGGGTGA TCGGCGGCGA CGCGATCCGG GTGGGGCTGC TCTACCGGCC GTCCGCGGTG
CAGCCGGTCG GCGGGTTCCA GATCCTGGAC TCGACCAAGG ACCAGGCATT CATCGACACC
GCCAACCGGC CGGTGCTGGT CCAGACGTTC CAGACCGCGG CCGGCGGCCG GTTCACCGTC
GCGGTGGCCC ACCTGAAGTC CAAGGGCTCG GCCTGCGCCG GTGATCCGGA CGCCGGTGAC
GGGCAGGGCA ACTGCAACCA GACCCGGACC GCCGCGGCGG CCGCCCTGGC CCGCTACCTG
GACACCGACC CGACCGGCAG CGGCGACCCG GACCGGTTGA TCGTCGGCGA CCTGAACTCC
TACGACCACG AGGACCCGAT CCGCACGCTG CGCGAGGCCG GGTACACCGA CCAGATCGCC
GCCACCGGCG GGGAGTTCGC CTACGGCTAC GTCTTCGACG GGCAGGCCGG CTACCTGGAC
CACGCGCTGG CCTCGGCCTC GTTGACCGGC CAGGTCACCG CGGCCGGCGA GTGGCACATC
AACGCCGACG AGCCGGACGT GCTCGACTAC GACACCACCT TCAAATCGCC CGAGCAGGAC
GCGCTGTTCG AGGCCAACCA GTTCCGCGCC TCCGACCACG ACCCGGTGCT GGTCGGAATC
GACGCGACCC GGGCCACCGC CGCGGCCTGC TACGGCGCCG CCCAACAGGT CTCGGCCTAC
CAGCCCGGGA CTGCGGGCAC CGGGCGGCCG GTGGACCGGC GGGACCCGGC CGTGGCGCTG
GGCCCGGCCG GGTCCGACTC GGGCGGCCGG GACGCGGTGT CCCTGGGCCG GGGCGGGCAG
CTCACCCTGG CCTTCACCCG GCCGTTGCAG AACCTGCCCG GCCCCGACCT GACCGTGGTG
CCCGGCTGGC CGCGGATCCT GACCGACCTG ACCGACCGGG CCCGGGTGTC GGTGTCCGCG
GACGGCGTGA GCTGGGTGGA CCTGGGCACG GTCCGCGGCT ACGCGGCCGG CACCTTCGAC
CTGGGCGGGG TGTCGACGGC GCGGTTCCTG CGGATCACCG ACACCAGCGG CGCGCTGCCC
TGGCCGCTGT CGCTGCTGCA GGACGGCTAC GACCTGGACG GGGTGGACGT GCGGGCCGGC
TGCGCCTGA
|
|---|
| Protein sequence | MRRFLSLSLA LAVLASAVLP GTAGAAAADP PAVWVNEIHY DNAGTDVDEA IEVAGPAGTD
LTGWSLVLYN GDTATAAIRY RTLALSGSLP DQSGGYGTAF VAAPGLQNGD RDGFALVDAA
GTVVQLLSYE GVFTAADGPA AGRSSTDIGI AQSGAPVGSS LQLTGTGRGP ADFTWASGTA
GFGQVNAGQQ FADPNPPADE CGAPATPIGT VQGSSATTAL AGQRVSVQAV VTAVEPGLGG
FYLQDPAGDG DPATADGLFV YGGSPTPAVG DAVRVTGTAG EYVTSSGASS QTQLSGSPTV
GVCQSGQALP EPVAVQFPLP AADALEPLEG MRVSLPQTLV ISEYFNYDRF GEVVLGLPLA
GQSRPFTPTA VVDPGPPAVE LAARNALSRI TLDDGSTTQN PAVLRHPGNG QPFGSTNSFR
GGDTVTGVTG VLDQTFGAYR VQPTGPADYA AVNPRPDSPP AVGGSTRVAS QNVLNYFLTV
DDGTTAGRIC GPARNQECRG ADNADELARQ RTKILAALGG LDADVVGLLE LENTPGVDPA
ADLVAGLNAR PGAQPYASVD TGVIGGDAIR VGLLYRPSAV QPVGGFQILD STKDQAFIDT
ANRPVLVQTF QTAAGGRFTV AVAHLKSKGS ACAGDPDAGD GQGNCNQTRT AAAAALARYL
DTDPTGSGDP DRLIVGDLNS YDHEDPIRTL REAGYTDQIA ATGGEFAYGY VFDGQAGYLD
HALASASLTG QVTAAGEWHI NADEPDVLDY DTTFKSPEQD ALFEANQFRA SDHDPVLVGI
DATRATAAAC YGAAQQVSAY QPGTAGTGRP VDRRDPAVAL GPAGSDSGGR DAVSLGRGGQ
LTLAFTRPLQ NLPGPDLTVV PGWPRILTDL TDRARVSVSA DGVSWVDLGT VRGYAAGTFD
LGGVSTARFL RITDTSGALP WPLSLLQDGY DLDGVDVRAG CA
|
|---|
| |