Gene Namu_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1560 
Symbol 
ID8447158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1721725 
End bp1722516 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content75% 
IMG OID645040687 
Producthypothetical protein 
Protein accessionYP_003200944 
Protein GI258651788 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0351056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0354487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGA AGATTGCCGT GGCCGGCGGA ACCGGGCTGG TCGGATCGAT GGTGGTGGCC 
GAAGCGCGGG CCGCCGGCCG GGAACCGGTC GTCCTGGCCC GATCGGCCGG GGTCGACCTG
CGGACCGGGG TCGGGCTGGA CGCGGCCCTG GACGGCGTCG ACGCGGTCAT CGACGTGATC
AACATCGATA CGCAACGCCG GCGCCGGGCG GTGGAGCTCT TCGGCACCGC AACCGCCACC
CTGCTGCGGG CCGAGGAACG GGCCGGGGTC CGGCATCACG TGATGCTGTC CATCGTCGGC
ATCGATCGGG TGGACACGGG GTATTACGCC GGCAAGCGCC GAGCGGAAGA GGTGGTCACC
GGTGGCCGGG TGCCCTGGAC GATTCTGCGG TCGACGCAGT TCCACGAGTT CGCGGACCTG
CTCCTGGGTC TGGTGCCGGG GCCGGTCGTG GTCGTGCCGA CCATGCTGAG CCGGCCGGTC
GCGGCCCGCG AGGTGGCGCG GCACCTGGTG ACGCTGGCCG GCGGGCCGGC CGCGGGCCGG
ACCCCGGAGA TCGCCGGCCC GCAGGAGCGG CGGATGGCCG ACCTGGTGCG TCGGCTGGCC
CGCGCCCGCG GATCCCGCCG GGCGGTGCTG GAACTGCCGG TGCTGGGCGC GGCGGCCACC
GCGACGGCGC GGGGCGCGCT GCTCCCGGCG GAACCCGGTC CCCGGGGGAT CGAGACGTTC
GAACAGTGGC TGGCCCGAAC CGGCCGGCCC GGGCAGCTGA CCCCGGACGA CCGCGTGAGC
GACCGACGAT GA
 
Protein sequence
MNPKIAVAGG TGLVGSMVVA EARAAGREPV VLARSAGVDL RTGVGLDAAL DGVDAVIDVI 
NIDTQRRRRA VELFGTATAT LLRAEERAGV RHHVMLSIVG IDRVDTGYYA GKRRAEEVVT
GGRVPWTILR STQFHEFADL LLGLVPGPVV VVPTMLSRPV AAREVARHLV TLAGGPAAGR
TPEIAGPQER RMADLVRRLA RARGSRRAVL ELPVLGAAAT ATARGALLPA EPGPRGIETF
EQWLARTGRP GQLTPDDRVS DRR