| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1548 |
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| Symbol | |
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| ID | 8447146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 1708816 |
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| End bp | 1709934 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 645040675 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_003200932 |
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| Protein GI | 258651776 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0412889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.326148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGGA TGACTGCTTC CGAGACCGCC ACCGGGACCG CCGCCGGCCC GATGGGTGAC
GCGCTCCCCC CGACCCATCC GCTGGTCGAC GGCCGCACCG CCGGGGCGCC GCTGCTGGCC
GCCTACCGGG GTACCCGGCC GGCCCACCGG CCCGTCTGGT TCATGCGCCA GGCCGGCCGG
TCGCTGCCCG AGTACCGCGA GGTCCGCCGG GGCATCGGCA TGCTCGAGTC CTGCCTGATG
CCCGAGCTGG CCGCGGAGAT CACCCTGCAG CCCGTGCGCC GGCACGGCGT GGACGCGGCG
ATCCTGTTCA GCGACATCGT GGTGCCGCTC AAGCTGGCCG GGATCGACGT GCAGATCGTG
GCCGGGACCG GCCCGGTGGT GGCCGCCCCG ATCCGCACCG CCGCCGACGT CGCCGCGTTG
CCGACGCTGG ATCCCGACGC CCTGGCGCCG GTGGCGGCCG AGGCCGCCGG CGTGGTCGCC
GAGCTCGGGT CGACGCCGCT GATCGGCTTC GCCGGGGCCC CGTTCACCCT GGCCTCCTAC
CTGGTCGAGG GCGGGCCCAG CCGCGATCAC CGGCTGACCA AGACCCTGAT GCACGCCGAG
CCGCAGGTCT GGCACGCGCT GCTGACCTGG GTGGCCGGGG TGACCGGCGC GTTCCTGCGG
GCCCAGATCC TGGCCGGCGC CTCGGCGGTG CAGGTCTTCG ACTCCTGGGC GGGCGCGTTG
AGCCGGCCCG ACTACGAGCG GTTCGTCGCC CCGCACTCGG CGGCCGTGTT CGCCGCGGTG
GCCGACCTGC CGGTGCCGCG GGTGCATTTC GGCGTCGGCA CCGGCGAGCT GCTCACCGCC
ATGCGCGACG TCGGCGCCGA CGTCGTCGGC ATCGACCACC GGATCCCGCT GGACGAGGCC
AGCGACCGGT TGGGCGGCGC GACGCCGGTG CAGGGCAACA TCGACCCGGC CCTGCTGTTC
GCCGGCCGTC AGGCCCTGCA TGCGCACGCC GAGGATGTGA TCCGGCGCGG CCGGGCCGCC
CCCGGGCACG TGGTCAACCT GGGTCACGGC GTCCCGCCGG ACACCGACCC GGACGTGCTC
ACCGAGCTGG TCGAGTTCGT GCATTCCCGG CCGGAATGA
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| Protein sequence | MAGMTASETA TGTAAGPMGD ALPPTHPLVD GRTAGAPLLA AYRGTRPAHR PVWFMRQAGR
SLPEYREVRR GIGMLESCLM PELAAEITLQ PVRRHGVDAA ILFSDIVVPL KLAGIDVQIV
AGTGPVVAAP IRTAADVAAL PTLDPDALAP VAAEAAGVVA ELGSTPLIGF AGAPFTLASY
LVEGGPSRDH RLTKTLMHAE PQVWHALLTW VAGVTGAFLR AQILAGASAV QVFDSWAGAL
SRPDYERFVA PHSAAVFAAV ADLPVPRVHF GVGTGELLTA MRDVGADVVG IDHRIPLDEA
SDRLGGATPV QGNIDPALLF AGRQALHAHA EDVIRRGRAA PGHVVNLGHG VPPDTDPDVL
TELVEFVHSR PE
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