Gene Namu_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1543 
Symbol 
ID8447141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1703691 
End bp1704482 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content77% 
IMG OID645040670 
ProductUroporphyrinogen III synthase HEM4 
Protein accessionYP_003200927 
Protein GI258651771 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.741801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.874786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCCGG TGGCGACCGG CACCTGTCCA GTGGCCGGGT GGCGGGTACT GGTGCCTCGG 
CCGGCCGAGC GGTCCGCGGA CCTGGTGCAG GCGCTGACCG CGGCCGGTGC CCGGCCGGAG
GTCGTGGAGC TGATCGGGAT CGCCGAGCCC GCCGACACCG CCGCGCTGGA TCTGGCCGTG
CTGGGCCTGT CCCGCGGCGA GGACGCCTGG GTCGCCTTCA CCTCGGTGAA CGCGGTCGAC
GCGGTCGTGG GCCGGGCCCG GGCGCTGACC GTCGACCCGG TGATCGCCGC CGACACCCGG
GTCGCCGCGG TCGGTCCGGC CACCGCCCGG GCGTTGCGCG CGGCCGGCCT GCCGGTCGAC
CTGCAACCGG CCGCCCGCGG CTCGGCGGCC GCCCTGGCCG CGGTCTTCCC GCAGGCCGCC
GGCGATCAGT CGGTGCTGCT GCCCCGGTCC GACCTGGCCC CGGACACCCT GCCAGCGGCC
CTGGCCGGCA AGGGTTTTCA GGTCCGTCCG GTGATCGCCT ACCGCACCGT GGTCCGGCCA
CCCGAGCCCG AGATCGCCCG GCGGCTGGCC GCCGGCGACT TCCACGCGGT GCTGTTCACC
TCGCCGAGCA CCGTGCAGGC GCTGCAGGGC GTCACCATCG CGCCGGGCAC CGCATTCGGC
GCGATCGGAG CGCCGACCCG CGCCGCGGCC ACCGCCGCCG GCCGCGAGAT CGCCTTCACC
GCGGCCGAAC CCGGATCGCG CGCCTACGTC CAGGCCCTGC TGTCCTACGC CCGCACCATC
CAGGAGGCCT GA
 
Protein sequence
MNPVATGTCP VAGWRVLVPR PAERSADLVQ ALTAAGARPE VVELIGIAEP ADTAALDLAV 
LGLSRGEDAW VAFTSVNAVD AVVGRARALT VDPVIAADTR VAAVGPATAR ALRAAGLPVD
LQPAARGSAA ALAAVFPQAA GDQSVLLPRS DLAPDTLPAA LAGKGFQVRP VIAYRTVVRP
PEPEIARRLA AGDFHAVLFT SPSTVQALQG VTIAPGTAFG AIGAPTRAAA TAAGREIAFT
AAEPGSRAYV QALLSYARTI QEA