| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1542 |
|---|
| Symbol | |
|---|
| ID | 8447140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 1702702 |
|---|
| End bp | 1703691 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645040669 |
|---|
| Product | Porphobilinogen synthase |
|---|
| Protein accession | YP_003200926 |
|---|
| Protein GI | 258651770 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.347928 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.882388 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCCGA CCGTCCGTCC CCGGCGACTG CGGCGCACCG CGCCCATCCG CCGGCTCGTG
CGCGAGACCC GGCTGCACCC GGCCGATCTC GTGCTGCCGG TGTTCCTCAA GCAGTCGCTG
ACCGAGCCCG CCCCGCTGAC CTCGATGCCC GGGGTGCTCC AGCACACCCG GGATTCGCTG
CGCCGGGCGG CCGCCGAGGC GGTGGCCGCC GGGGTGGGCG GTTTGATGGT GTTCGGGGTG
CCCTCGGTCC GCGACGCCGT CGGCTCCCAG GCCACCGACC CGGCCGGCAT TCTCAACCTG
GCCATGGCCG ACCTGCGAGC CGAGGTGGGC CCGGACACGG TGCTGATGGC CGACCTGTGC
CTGGACGAGT TCACCGACCA CGGGCACTGC GGGGTGCTCA CCGCCGACGG CGCGGTCGAC
AACGACGCCA CCCTGCTGCG CTACCGGGAG ATGGCCGTGG CCCTGGCCGA GGCCGGCAGC
GACATGGTCG GCACCTCCGG GATGATGGAC GGCCAGGTCG GCGCGGTCCG CGACGCCCTG
GACACCACCG GCCACACCGA CACCGCGGTC TTCGCCTACG GGGCCAAGTA CGCCTCGGCG
TTCTACGGCC CGTTCCGGGA GGCCGTCGAC TCGGCCCTGC AGGGCGACCG GCGCACCTAC
CAGCAGGATC CGGCCAACCG GCGGGAGGCC GCCCGGGAGG TGGCGCTGGA CGTTGCCGAG
GGCGCCGACC TGATCATGGT CAAGCCGGCC ATGGCCTACC TGGACGTGCT CTCAGACGTG
GCCGCCGCGA CCACGGTTCC GGTGGCTGCG TATCAGGTCT CGGGCGAGTA CGCGATGATC
GAGGCGGCCG CGGCGAACGG GTGGATCGAC CGGAACCGGG CGATCGCCGA GACGTTGACC
GGCATCCGGC GGGCCGGCGC GCAGATCGTG CTGACCTACT GGGCGGCCGA GGTGGCGGCG
GAACTGTCCG CCGGGAGGGA TTTCTCGTGA
|
|---|
| Protein sequence | MYPTVRPRRL RRTAPIRRLV RETRLHPADL VLPVFLKQSL TEPAPLTSMP GVLQHTRDSL
RRAAAEAVAA GVGGLMVFGV PSVRDAVGSQ ATDPAGILNL AMADLRAEVG PDTVLMADLC
LDEFTDHGHC GVLTADGAVD NDATLLRYRE MAVALAEAGS DMVGTSGMMD GQVGAVRDAL
DTTGHTDTAV FAYGAKYASA FYGPFREAVD SALQGDRRTY QQDPANRREA AREVALDVAE
GADLIMVKPA MAYLDVLSDV AAATTVPVAA YQVSGEYAMI EAAAANGWID RNRAIAETLT
GIRRAGAQIV LTYWAAEVAA ELSAGRDFS
|
|---|
| |