| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1530 |
|---|
| Symbol | |
|---|
| ID | 8447128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1687983 |
|---|
| End bp | 1689086 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645040660 |
|---|
| Product | Alcohol dehydrogenase GroES domain protein |
|---|
| Protein accession | YP_003200917 |
|---|
| Protein GI | 258651761 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0540116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGCCG CCGTCTTCCA CGCGCCCGGC ACCGTCGTGC TGGAGGACCG GCCGATTCCC
GCGGTCGGGC CGGGCGATCT GCTCATCAGG GTGCAGGCCG CCTCGGTCTG CGGCACGGAT
CTGCGCATCT TCAACTACGG CCACTTCAAG CTCGCCCCCG GCGCCCACCG GGTGCAGGGT
CACGAGACGG CCGGCGAGAT CGTGGCCACC GGCGACGAGG TCACCGGGTA CGCGGTGGGC
GACCGGGTCA GTGTCACCCC CAACGTCGGC TGCGGCCGGT GCCCGATGTG CCTGCGCGGG
TTGAACAACA TGTGCCCGGA TTACGAGGCC TTCGGGGTCA GCCTGGACGG CGGATTCGCC
GAATACCTGC TGGTGCCGGC CTTCGCGGTG CAGCGGGGCA ACGTCTTCCA CCTGCCGGCC
GGTCTGGACT ACACCCAGGC CGCCCTGGTC GAGCCGTTCT CGTGCTGCCT GCGGGGGGTG
CGGTCGGTCG GGATCGGTCC CCAGGACGAC GTGCTGGTGG TCGGGGCCGG GCCGATCGGG
GCGTTCACCG TCATGCTGGC CCGGCTGGCC GGGGCCCGGC GGATCATCGT GGCCAACCGC
AGCCGGGGCC GGCTGGCGCA GCTGGCCGGC TACGGCGCCG ACACCCTGAT CGAGGTCGGC
GACCGGGACC TGGTCGAGGC GGTCAAGGCC GAGACCGGCG GCCGCGGCGT CGATGTCGCC
ATCACCGCGG CCTCCAGCGC GCAGGTGCAG GCGGACGCGG TGCAGCTGCT GGCCACCCAC
GGCCGGCTCA ACTTCTTCGC CGGGCTCAGC GGTCGGGGCG GCCCACCCAC GGTGGCCATC
GACACCAACC GGGTGCACTA CCAGGGCCTG ACGCTGACCG GCACGACCGG ATCGAGCAAC
GCCGACTACG CCGACGCGCT GCAGATCGTG GGGCAGGGCC GGGTCGACCT GAGCGGCCTG
CTCACCCGGA CGTTCTCGGT CGAGGACATC CACGAGGCCT TCGCCTACGC CGCGTCCGGC
GCCGGCATGA AGGCCGGCAT CGCCTTCGGC ACCGACCCGT CCGCCCGCGC AGCGGACCTG
GAACAGGCAG GAGTGCCCGC ATGA
|
|---|
| Protein sequence | MRAAVFHAPG TVVLEDRPIP AVGPGDLLIR VQAASVCGTD LRIFNYGHFK LAPGAHRVQG
HETAGEIVAT GDEVTGYAVG DRVSVTPNVG CGRCPMCLRG LNNMCPDYEA FGVSLDGGFA
EYLLVPAFAV QRGNVFHLPA GLDYTQAALV EPFSCCLRGV RSVGIGPQDD VLVVGAGPIG
AFTVMLARLA GARRIIVANR SRGRLAQLAG YGADTLIEVG DRDLVEAVKA ETGGRGVDVA
ITAASSAQVQ ADAVQLLATH GRLNFFAGLS GRGGPPTVAI DTNRVHYQGL TLTGTTGSSN
ADYADALQIV GQGRVDLSGL LTRTFSVEDI HEAFAYAASG AGMKAGIAFG TDPSARAADL
EQAGVPA
|
|---|
| |