| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1505 |
|---|
| Symbol | obgE |
|---|
| ID | 8447103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1661805 |
|---|
| End bp | 1663319 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645040636 |
|---|
| Product | GTPase ObgE |
|---|
| Protein accession | YP_003200893 |
|---|
| Protein GI | 258651737 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0536] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA
[TIGR03595] Obg family GTPase CgtA, C-terminal extension |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00667966 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGAT TCGTGGATCA CGCGGTGCTG CACCTGCAGG CCGGCAACGG CGGTCACGGC
TGCGCCTCGG TGCACCGGGA GAAGTTCCGC CCGCTGGGCG GCCCGGACGG CGGGAACGGC
GGCAACGGCG GCGACGTCAC CCTCGTCGTC GACGACAGCG TGCACACCCT GCTGGACTTC
CATTTCCGGC CGCACGCCAA GGCCGGGAAC GGTCGGCCCG GACAGGGCGA CAACAAGGAC
GGCGCCAACG GCGAGGCCCT GGTGCTCAAG GTGCCCGCGG GCACCGTCGT GCTCGGCCCG
GACGGGACCG TGCTGGCCGA CCTGGTCGGT GCCGGGTCGC AGTACGTGGC CGCCCGCGGC
GGCCGGGGTG GGCTGGGCAA CGCCGCGCTG GCTTCGCGGG CCCGCAAGGC GCCGGGTTTC
GCGCTGCTCG GCGAACCCGG CGAGTTCGCC GAGATCGTGC TGGAGCTCAA GTCGGTCGCC
GATGTCGGGC TGGTCGGTTT CCCCAGCGCC GGCAAGTCCT CGCTGGTCTC GGTGCTGTCC
GCGGCCCGGC CGAAGATCGC CGACTACCCG TTCACCACGC TGGAGCCGAA CCTGGGTGTG
GTCACCGCCG GCTCCGAGGT GTTCACCGTC GCCGACGTGC CCGGCCTGAT CCCCGGGGCC
AGCCAGGGCA AGGGTCTCGG TCTGGAGTTC CTGCGGCACA TCGAGCGGTG CTCGGTGCTG
GCCCACGTCA TCGACTGCGC GACCTACGAG ACCGGCCGCG ATCCGCTCTC GGACATCACT
GCGCTGGAGT TCGAGCTCGC CGAGTACGGC GCCGACCTGG CCAGCGACCT GACCGAGAAG
CCTCGGCTGG TCGTGCTGAA CAAGATCGAC GTGCCGGAGG CGCGGGAGCT GGCCGAGTTC
GTCCGGCCCG ATCTGGAGGC CGCCGGCTAC CGGGTGTTCC TGATCTCCGC CGTGACCCAC
GAGGGCCTGT CCGAGCTGAA GTTCGCGATG GCCCAGGCCG TCGCCGCCGA CCGGGCCGCC
CGCCCGGCCG CGCCGGCCCC CCGGCTGGTC GTGCGGCCCA AGCCGGTGGA CTCCGAGGAG
TTCCAGGTCA GCATCGACCC CGAGGTCGAG GGTGGCTTCG TGGTCACCGG GGCCCGGCCG
CAGCGCTGGA TCCGGCAGAC CGACTTCACC AACGAAGAGG CCGTCGGCTA CCTGGCCGAC
CGGCTGGCCC GGCTCGGGGT CGAGGAGCAG CTGGCCGCCA TCGGGGCCCA ACCGGGGGCG
CCGGTCACCA TCGCCGACAT CACCTTCGAC TGGGAGCCGA CCACGCTGGC CGGCGTCGAC
ACCGTGCCGA TCACCGCGCG CGGCACCGAC CAGCGGCTGG CCCGCAGCGA CCGGGTCGGC
GCGGCCGAGC GCAAGGCGCT GCACCGGTTG CGTCGCGGGT TGGACGTCGA CGGGCACACG
CTGGACTCCT CCCTGGACTC GTCGGTGGAC AGGCCGGACC CGACCCCGGA CAGTCGGGCC
GGGTCGCAGT CGTGA
|
|---|
| Protein sequence | MARFVDHAVL HLQAGNGGHG CASVHREKFR PLGGPDGGNG GNGGDVTLVV DDSVHTLLDF
HFRPHAKAGN GRPGQGDNKD GANGEALVLK VPAGTVVLGP DGTVLADLVG AGSQYVAARG
GRGGLGNAAL ASRARKAPGF ALLGEPGEFA EIVLELKSVA DVGLVGFPSA GKSSLVSVLS
AARPKIADYP FTTLEPNLGV VTAGSEVFTV ADVPGLIPGA SQGKGLGLEF LRHIERCSVL
AHVIDCATYE TGRDPLSDIT ALEFELAEYG ADLASDLTEK PRLVVLNKID VPEARELAEF
VRPDLEAAGY RVFLISAVTH EGLSELKFAM AQAVAADRAA RPAAPAPRLV VRPKPVDSEE
FQVSIDPEVE GGFVVTGARP QRWIRQTDFT NEEAVGYLAD RLARLGVEEQ LAAIGAQPGA
PVTIADITFD WEPTTLAGVD TVPITARGTD QRLARSDRVG AAERKALHRL RRGLDVDGHT
LDSSLDSSVD RPDPTPDSRA GSQS
|
|---|
| |