Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1500 |
Symbol | |
ID | 8447098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1655952 |
End bp | 1656668 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645040631 |
Product | cyclase family protein |
Protein accession | YP_003200888 |
Protein GI | 258651732 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.256572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGGG CCGGCAGGCC GGTCGACCGC GAGGTGGTCG ATCTGTCGCA TCCGATCGTC GAGGGCATGA CGACCTACCC GGGCATCCCG GGTCCGACGC TCGGTGCGCA TCTGACGTTC GACGAGTCGG CCGCCCACTA CGCGGCCGGG ACCGAGTTCT CGATCGGCAC CATCAGCATG GCCGCCAACA CCGGCACCTA CCTGGACACC CCGGCGCACC GCTACCGGGA CGGCGACGAC CTGTCCCGGG TGGACCTGGC CCGGATGGTC GACCGGTCCG GTGTCGTGGT TCGGGCTCGC GATCTCGTCG CGGCCGACCG GGCGATCGAC GAGGCGCGCC TGCGGTCCGC GCTGGAGGCG GCCGGCGTGA GCGAGCCGGC CGGCCGGGCC GTGCTGATCG AGACCGGACA CAGCGATCGG TGGGGGACCA GCGCGTACTT CACCGACCAC CCGTACCTGA CCGACGACGC GGTCGAGTTC CTGGTCTCGG TCAAGCCCTC CCTGGTCGGC ATCGATTCGC TCAACATCGA CTCGACCCAT ACCGGGCGCC GGCCGGCCCA CACCTGGCTG CTGGCGGCGG GGATTCCCGT GGTCGAGCAC CTGACCGCGC TGGCCGAACT GCCGGACACC GGATTCCGGT TCACCGCGGC GCCGCCGGCC GTCGTCGGCA TGGGCACGTT CACGGTGCGC GCGTTCGCGG TCCTGACCGC TGACTGA
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Protein sequence | MTGAGRPVDR EVVDLSHPIV EGMTTYPGIP GPTLGAHLTF DESAAHYAAG TEFSIGTISM AANTGTYLDT PAHRYRDGDD LSRVDLARMV DRSGVVVRAR DLVAADRAID EARLRSALEA AGVSEPAGRA VLIETGHSDR WGTSAYFTDH PYLTDDAVEF LVSVKPSLVG IDSLNIDSTH TGRRPAHTWL LAAGIPVVEH LTALAELPDT GFRFTAAPPA VVGMGTFTVR AFAVLTAD
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