| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1495 |
|---|
| Symbol | valS |
|---|
| ID | 8447093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1650245 |
|---|
| End bp | 1652944 |
|---|
| Gene Length | 2700 bp |
|---|
| Protein Length | 899 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645040626 |
|---|
| Product | valyl-tRNA synthetase |
|---|
| Protein accession | YP_003200883 |
|---|
| Protein GI | 258651727 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0525] Valyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.280307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTTCCA CCGCCGCCCA TCCCGCACAC GACGATCTGC CCAAGCAGTA CGACCCGGCG
GCGGTCGAGG TACCCCTGTA CGCACGTTGG CAGCAGGCCG GCTACTTCAA GGCCGACGAG
GGCGCGGTGC TGCGCGGCGA GCGCAAGCCG TTCTCGATCG TGCTGCCGCC GCCCAATGTC
ACCGGCAACC TGCACGTCGG GCATGCGCTG GACCACACCC TGATGGACGT GCTCACCCGC
TGGCACCGGA TGTCCGGCGA CGAAGCGCTG TGGTTGCCCG GCATGGATCA CGCCGGCATC
GCCACCCAGA CCGTGGTCGA ACGGCAGCTG GCCTCGAAAG GAAGCAGCCG GCAAGAACTT
GGCCGCGAGC TGTTCGTGCA GAAGGTGTGG GACTGGAAGG CCGAATCCGG CGGCGCGATC
CTGGGCCAGA TGAAGCGCCT GGGCGACTCG GTCGACTGGG ACCGTGAGCG GTTCACCCTC
GACGAGGGAC TGTCCGACGC CGTGCAGACC ATCTTCAAGC GGATGTTCGA GGACGGCCTG
ATCTACCGGG CCGAGCGGAT CATCAACTGG TGCCCGGGGT GCCTGACCGC CCTGTCCGAC
ATCGAGGTCG AGCACTCCGA CGACGACGGC GAACTGGTCT CCATCCGCTA CGGATCGGGC
GAGGGGGACG GCGAGGCCGA TGACGCGGTG GTGGTCGCCA CCACCCGGGT GGAGACCATG
CTCGGAGACA CCGCGATCGC GGTGCACCCC GACGACGAGC GGTACCGGCA CCTGATCGGG
CGCACCGTGC TGCTACCCAT CGTCAACCGG CAGATCCCGG TGGTGGCCGA CGAGCACGTC
GACCCGCAGT TCGGCACCGG CGCGGTCAAG GTCACCCCGG CGCACGACCC CAATGACTTC
GAGATCGGCC GCCGGCACGG CCTGGACGCG CCGACGATCA TGAACGAGAG GGCCGAGATC
ACCGGCACCG GAACCCGTTT CGACGGGATG GACCGGTTCG CGGCCCGGGT GGCAATCAAG
CAGGAGCTGC GCGCACAGGG CCGGATCGTG GCCGAGAAGG TGCCCTACGT GCACGCCGTC
GGCCATTGCT CGCGGTCCGA CGACGTCATC GAGCCGCGGC TGTCCACCCA GTGGTTCGTG
CGGGTGGAGT CGCTGGCCAA GGCGGCCGGC GACGCCGTCC GCGACGGCCG GACGACGATC
CACCCGCCCG AGCTCGCCGC CCGGTACTTC GACTGGGTCG ACAACATGCA CGACTGGTGC
ATCTCCCGGC AGCTGTGGTG GGGGCACCGC ATCCCCGTCT GGTACGGACC GGACGGTCAG
ATGCGGGCGG TCGGTCCGGG GGAGGAGCCG CCGGGCGAGG GCTGGACCCA GGACCCCGAC
GTGCTCGACA CCTGGTTCTC CTCCGGGCTG TGGCCGTTCT CGACCATGGG CTGGCCGGAG
CAGTCCGACA CCCTCAAGGC GTTCTATCCG ACCTCGGTGC TGGTCACCGG CTACGACATC
CTGTTCTTCT GGGTCGTCCG GATGATGATG TTCGGCCTGT ACGCGACGGC CAACGAGGAC
GGCGAGCCGC AGGTGCCGTT CCACACGGTG GCCCTGCACG GGCTGGTCCG GGACCAGTTC
GGCAAGAAGA TGTCCAAGTC GCGGGGCAAT ACCGTGGACC CGCTCAAGTG GATCGACACC
TACGGGGCCG ACGCGGTCCG GTTCACCCTG GCCCGCGGCT CCAACCCGGG GGCCGACCAG
GCCATCGCCG AGGAGTGGGT AGCCGGCGCC GGCAAGTTCT GCTCGAAGCT GTTCAACGCC
ACCCGGTTCG CGCTGCTCAA CGGTGCGGTG GTGCCGGACG TCGCCCTGAT CGAGGCGGAC
CTGACCCCGG CCGACCGGTG GATCCTGGAC CGGCTGGACG AGATGGTCAC GACCACCACG
GCGCTGCTGG GCGACTTCCA GTTCGCCAAG GCCGCCGAGG GTCTCTACCA CTTCGCCTGG
GACGAGGTCT GCGACTGGTA CCTGGAACTG GCCAAGGTGC AGATCGCGGC CGGCGAGCGG
GGCGAGGACG GCCCCGACCG GTTGGTCACC ACCCGGCAGG TGCTCGGCAC CGTGCTGGAC
GGCCTGCTGC GGCTGCTGCA CCCGTTCGTG CCGTTCGTCA CCGACACCCT GTGGACGTCG
CTGACCGGCC AGGAGTCGCT GGTGATCGCG GCCTGGCCGG AGTCCTCCGG GCGCACCGCG
CAGCCGGCGG CGGCGGACTG GGTCCGCGAC GTGCAGACCC TGTCCACCGA GATCCGGCGG
GCCCGGGCCG ATCAGAAAGT GCCGCCGAGC CGCGCCCTGC CGGCCCGGAT CGTAGGCGCC
GACGGCGGCC TGGACCTCAC CGCGCGGGCA CTGACCCGGC TGACCGCGGA CGGCGGTGAC
GCGGCCGGCT TCCAGGCCAC CGTGACGCTG CCGGTTCGGC TGTCCGCCGG CGTGGTCACG
GTGCAGCTGG ACACCAGCGG CGTGCTCGAC GTGGGCGCCG AGATCGCCCG GGCGACCAAG
GATCTGGCTG CCGCCCAGAA GGAGATCGCG GACTGCGGGC GCAAGCTCGG CAACGCCGAC
TTCCTGGCCA AGGCCCCCGA GGCGGTGGTC GGCAAGATCC GGGCCCGCGC CGACAAGGCG
GCCCAGGACG TCGACCGGCT CACCGAGCGG TTGCGGTCGC TGCGCGAGGA CGGCCGGTGA
|
|---|
| Protein sequence | MTSTAAHPAH DDLPKQYDPA AVEVPLYARW QQAGYFKADE GAVLRGERKP FSIVLPPPNV
TGNLHVGHAL DHTLMDVLTR WHRMSGDEAL WLPGMDHAGI ATQTVVERQL ASKGSSRQEL
GRELFVQKVW DWKAESGGAI LGQMKRLGDS VDWDRERFTL DEGLSDAVQT IFKRMFEDGL
IYRAERIINW CPGCLTALSD IEVEHSDDDG ELVSIRYGSG EGDGEADDAV VVATTRVETM
LGDTAIAVHP DDERYRHLIG RTVLLPIVNR QIPVVADEHV DPQFGTGAVK VTPAHDPNDF
EIGRRHGLDA PTIMNERAEI TGTGTRFDGM DRFAARVAIK QELRAQGRIV AEKVPYVHAV
GHCSRSDDVI EPRLSTQWFV RVESLAKAAG DAVRDGRTTI HPPELAARYF DWVDNMHDWC
ISRQLWWGHR IPVWYGPDGQ MRAVGPGEEP PGEGWTQDPD VLDTWFSSGL WPFSTMGWPE
QSDTLKAFYP TSVLVTGYDI LFFWVVRMMM FGLYATANED GEPQVPFHTV ALHGLVRDQF
GKKMSKSRGN TVDPLKWIDT YGADAVRFTL ARGSNPGADQ AIAEEWVAGA GKFCSKLFNA
TRFALLNGAV VPDVALIEAD LTPADRWILD RLDEMVTTTT ALLGDFQFAK AAEGLYHFAW
DEVCDWYLEL AKVQIAAGER GEDGPDRLVT TRQVLGTVLD GLLRLLHPFV PFVTDTLWTS
LTGQESLVIA AWPESSGRTA QPAAADWVRD VQTLSTEIRR ARADQKVPPS RALPARIVGA
DGGLDLTARA LTRLTADGGD AAGFQATVTL PVRLSAGVVT VQLDTSGVLD VGAEIARATK
DLAAAQKEIA DCGRKLGNAD FLAKAPEAVV GKIRARADKA AQDVDRLTER LRSLREDGR
|
|---|
| |