Gene Namu_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1489 
Symbol 
ID8447087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand+ 
Start bp1644782 
End bp1645453 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content73% 
IMG OID645040620 
Producturacil-DNA glycosylase 
Protein accessionYP_003200877 
Protein GI258651721 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0103431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.970473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCAC CGCTGAGTTC CCTTGTCGCC GACGACTGGG CGCAGTCCCT GGAACCGGTG 
GCCGACCGGA TCACCGCGAT GGGCGAGTTC CTGCGGGCCG AGGTGGCCGC CGGCCGCCCG 
TACCTGCCGG CCGGCCCGCA CATCCTGCGC GCCTTCGAAC GGCCGCAGGC CCAGGTCAAG 
GTGCTCATCG TGGGCCAGGA CCCGTATCCC ACCCCCGGCC ATCCGATCGG CCTGTCGTTC 
GCGGTGGATC GCCACGTGCG TCCGGTGCCG CGCTCCCTGG GCAACATCTA CAAGGAACTG 
CAGGCCGACA CCGGGATCAC CCCGCCCGCG CACGGCGACC TGACCGCCTG GTCCGACCAG 
GGGGTGCTGC TGCTCAACCG GGTGCTGACC GTCCAGCCGG GCAAGCCCGC CTCGCATCGA 
GGCAAGGGCT GGGAGCCGGT CACCGACGAG GCCATCCGCT CGCTGGTGCG TCGCGGCGGC 
CCGCTGGTGG CCATCCTGTG GGGCCGGGAC GCGCAGACCC TGCGGCCGCT GCTGGGTCAG 
ACCCCGGTGA TCGAGTCCGC GCACCCGTCG CCGATGTCGG CCGACCGCGG CTTCTTCGGG 
TCCCGGCCGT TCTCCCGGGT CAACCGTTCG CTGGTCGAGC AGGGCGGCGA ACCGGTCGAC 
TGGACCTTGT GA
 
Protein sequence
MPAPLSSLVA DDWAQSLEPV ADRITAMGEF LRAEVAAGRP YLPAGPHILR AFERPQAQVK 
VLIVGQDPYP TPGHPIGLSF AVDRHVRPVP RSLGNIYKEL QADTGITPPA HGDLTAWSDQ 
GVLLLNRVLT VQPGKPASHR GKGWEPVTDE AIRSLVRRGG PLVAILWGRD AQTLRPLLGQ 
TPVIESAHPS PMSADRGFFG SRPFSRVNRS LVEQGGEPVD WTL