Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1477 |
Symbol | |
ID | 8447075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1632420 |
End bp | 1633133 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 645040608 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003200865 |
Protein GI | 258651709 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.958166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.570733 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACAGC ATAGCGGTAT CGGTGTCCTG GACAAAGCCG TCGCCGTGCT CACCGCGGCG GCCGCGAACC CGTTGACGCT GGCCGAACTG TGTGCGGTCA CCGGGCTGCC CCGGGCCACC GCGCACCGGC TGGCCGTCGG CCTGGAGGTG CACGGGCTGC TGACCCGGGA CGCCGGCGGC CGGTGGTGCC AGGGACCGCA GCTGGCCGTG CTGGCGGCCG GGGCGCCCGA CCCGCTGGTG CGGGCCAGCG CCGGGGTGCT GCCCGAGCTG CGGGACATCA CCGGCGAGAG CGTGCAGGTC TACCGGGCCG ACGGGCTGTC CCGGGTGTGC ATTGCGGTGG CCGAACCGAC CTCCGGGCTG CGGGACACGG TGCCGTTGGG GGCCCGGCTG CCGATGACCG CGGGTTCGGG TGCCCAGGTG CTGACCGCCT GGGCCGATCC GGCCTACCGG CGGGCAGTCC TGGCCCAGGC CGGCTTCACC GAACGGTCCC TGGACCAGGT GCGCCGGCGC GGCTGGGCGC AGTCGGTGGC CGAGCGCGAG GCCGGGGTGG CCTCGGCGTC CGCACCGGTC CGCTCACCCG CGGGCGAGGT GATCGCGGCG GTGTCGGTGT CCGGCCCGGT GGACCGGATG GGCCGGCAAC CCGGTGTCCG CTGGGCACAG GACCTGGTGG CCGCGGCCCG CGCGTTGACC GCCGCCCTGG AACCGGCGTC CTGA
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Protein sequence | MGQHSGIGVL DKAVAVLTAA AANPLTLAEL CAVTGLPRAT AHRLAVGLEV HGLLTRDAGG RWCQGPQLAV LAAGAPDPLV RASAGVLPEL RDITGESVQV YRADGLSRVC IAVAEPTSGL RDTVPLGARL PMTAGSGAQV LTAWADPAYR RAVLAQAGFT ERSLDQVRRR GWAQSVAERE AGVASASAPV RSPAGEVIAA VSVSGPVDRM GRQPGVRWAQ DLVAAARALT AALEPAS
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