| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1473 |
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| Symbol | |
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| ID | 8447069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1626891 |
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| End bp | 1628594 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645040602 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_003200861 |
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| Protein GI | 258651705 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0401989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.232959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGT CGACCACCTC CGCCGTCTCG CCGGTTGCCC CGCCGCGAGT TGCGACCCGT
CGCAGCTCGC CGCTGGGCGA TGCCTTCCAC GTCTTCGACA CCACGCTGCG CGACGGTGCC
CAGCGCGAGG GCATCACCTA CTCGGTGGCC GACAAGATCG CGGTCGCGAC GCTGCTCGAC
GAGCTGGGGG TCGGCTTCAT CGAGGGTGGC TGGCCGGGGG CGATGCCCAA GGACACCGAG
TTCTTCGCCC GGGCCGCGGC CGGGGAGCTG GCGCTGACCA CGGCCAAGCT GGTCGCCTTC
GGGGCCACCC GTAAGGCCGG CACCCGGGCC GATCAGGACC CGCAGGTCCG GGCCCTGCTC
GACTCCGGGG CCGAGGTGAT CACGCTGGTC GCCAAGTCCG ACGTGCGGCA TGTGGAACGC
GCCCTGCGCA CCACGCTGAG CGAGAACCTG GCCATGGTCG GGGACACCGT GCGGCTGCTG
GTCGACCACG GCCGGCGGGT GTTCCTGGAC TGCGAGCACT TCTTCGACGG GTACGCCGCC
GACCGGGACT ACGGGCTGCG GGTGGCCGAG GCGGCGGTGA GTGCCGGCGC CGACGTGGTC
GTGCTGTGTG ACACCAACGG CGGCATGCTC CCGATGGGCA TCGAGCGGGT GGTCCGTGAG
GTCCGCGAGC GCGGCGGCTT CCGCGTCGGC ATCCATTGCC AGGACGACAC CGGCTGCGCG
GTGGCCAACA CGGTCGCCGC GGTGCAGGCC GGGGCCACCC ATGTGCAGTG CACGGCCAAC
GGTTACGGCG AGCGGGCCGG CAACGCCGAC CTGTTCGCGG TGGTGGGCAA CCTGACCACC
AAGATGAACC TGCCTGTGCT GCCGGAGGGC GCGCTGCCGG AGATGATGCG GGTTTCGCAT
GCGCTGGCCG AGCTGGCCAA CATCGCCCCC AACACCCACC AGGCCTACGT CGGCTCGTCC
GCGTTCTCGC ACAAGGCCGG CCTGCACGCC TCGGCGATCA AGGTCGACCC GGACCTGTAC
AACCACCTGG ACCCGACCGT CGTCGGCAAC GACATGCACA TCCTGATCAC CGAGATGGCC
GGCCGGGCCT CGGTCGAGCT CAAGGCCAAG GAACTCGGCG TCGATCTGGC CGGGCGCACC
GACGCGGTGG GCCGGATCGT CGACGCGGTC AAGGACCGTG AGGCCGCCGG CTGGTCGTAC
GAGGCGGCGG ACGCCTCCTT CGAGCTGCTG ATCCGCGACG AGCTGGCGGC CACCGACGCC
GCCGCGGCCG GCGTCGAGGT GCCGCCGCGG CCGTTCACCC TCGAGTCCTA CCGGGTGATC
GTGGAGAACA CCGGCGGCAC GGTCAGCAGT GAGGCCACGG TGAAGGTGCA TGTCGGCGAC
CGGCGGATCA TCACCACCGC CGAGGGCAAC GGACCGGTCA ACGCCCTGGA CTCGGCGTTG
CGCAGCGCCG TCGCCGAGCG CTACCCGGAG CTCAACGAGG TCGAACTGGT CGACTACAAG
GTCCGCATCC TGGCCGGCCA TGCCGGCACC GACTCGATCA CCCGGGTGTT GGTGTCCAGC
TCGATCCAGG GCCTGCGCGG CCCCCAGGAA TGGACCACCG TGGGCGTGCA CGCCAACGTC
GTCGAGGCCT CCTGGCAGGC GCTGGTCGAC GCACTCGTCT ACGTCCTGCC CTCGTCGACG
GGAAACCCCG TCCTGCCCAC CTGA
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| Protein sequence | MTVSTTSAVS PVAPPRVATR RSSPLGDAFH VFDTTLRDGA QREGITYSVA DKIAVATLLD
ELGVGFIEGG WPGAMPKDTE FFARAAAGEL ALTTAKLVAF GATRKAGTRA DQDPQVRALL
DSGAEVITLV AKSDVRHVER ALRTTLSENL AMVGDTVRLL VDHGRRVFLD CEHFFDGYAA
DRDYGLRVAE AAVSAGADVV VLCDTNGGML PMGIERVVRE VRERGGFRVG IHCQDDTGCA
VANTVAAVQA GATHVQCTAN GYGERAGNAD LFAVVGNLTT KMNLPVLPEG ALPEMMRVSH
ALAELANIAP NTHQAYVGSS AFSHKAGLHA SAIKVDPDLY NHLDPTVVGN DMHILITEMA
GRASVELKAK ELGVDLAGRT DAVGRIVDAV KDREAAGWSY EAADASFELL IRDELAATDA
AAAGVEVPPR PFTLESYRVI VENTGGTVSS EATVKVHVGD RRIITTAEGN GPVNALDSAL
RSAVAERYPE LNEVELVDYK VRILAGHAGT DSITRVLVSS SIQGLRGPQE WTTVGVHANV
VEASWQALVD ALVYVLPSST GNPVLPT
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