| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1471 |
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| Symbol | |
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| ID | 8447067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1624108 |
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| End bp | 1625700 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645040600 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_003200859 |
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| Protein GI | 258651703 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00147089 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.075058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCAAAC CCGTCGTGCT GATCGCCGAG CAACTGGCCC AGTCCGCCCT GGACGTCCTC
GGCTCCGAGG TCGAGATCCG GCACGTGGAC GGCGCCGATC GCAGCGCCCT GCTTCCGGCC
CTCAAGGACG CCGACGCGGT GCTGATCCGG TCGGCGACCA CGATGGACGC CGAGGCGCTC
GCGGCCGCGC CGCAGCTCAA GGTCGTCGCC CGGGCCGGCA TCGGCCTGGA CAACGTGGAC
GTGCCTGCGG CCACCGCCAA GGGCGTGCTG GTGGTCAACG CCCCCCAGTC GAACATCATC
ACCGCGGCCG AGCACGCCAT CGCGCTGCTG CTCTCGGTGG CCCGCAAGAT CCCCGCCGCT
GACGCCTCGT TCCGCGCGGG GGAGTGGAAG CGCAGCAAGT TCACCGGCGT CGAGATCGCC
GACAAGACGG TTGGCGTGGT CGGCCTGGGC CGCATCGGCC AGCTGTTCGC CGCCCGGATC
GCGGCGTTCG GCACCAGCGT CATCGCCTAC GACCCATACC TGCAGCCGGC CCGCGCGGCC
GCCCTCGGCG TGCGCCTGGT CGACCTGCCG ACGCTGCTGG CCACCGCCGA CATCATCTCC
ATCCACCTGC CCCGCACGCC CGAGACGCTG GGGCTGATCG GCGCGGCCGA GCTGGCCACC
GTCAAGCCCG GGGTGATCAT CGTCAACGCC GCCCGCGGTG GACTCATCGA CGAGCAGGCG
TTGGCCGACG CGCTCACCGA GGGCCGGGTG GCCGGGGCCG GACTCGACGT GTTCGTCAAC
GAGCCGCTGG GCGCCGACAG CCCCCTGCGG ACCGCCCCCA ACACGGTGCT CACCCCGCAC
CTGGGCGCCT CCACCAACGA GGCCCAGGAC AAGGCCGGCA CCGCCGTCGC CCGGTCGGTC
AAGCTCGCGC TGCGCGGCGA TTTCGTCCCT GACGCGGTGA ACGTGCAGGC GGCCGGCCCG
GTCTCGGACG AGCTGCAGCC GTGGATCCCG CTGGTGTCGC GGCTGGGCAC CATCCTCACC
GCGGTCACCG GCGGCGTGCC CAGTCAGGTC TCGGTCGAGG TCCGCGGCGA CCTGGCCGCG
ATGGATACCT CGATCCTGCA GCTGGCCGCC GTCCGCGGCA TCTTCGGCAG CGTCATCACC
GACGCCGTCA CCTTCGTCAA CGCGCCGGCC CTGGCCGCCG AGCACGGGTT GACCCTGACC
GGCGAGTCCA CCGAGGAGAT CGGCGACTTC CGGTCCTCGG TGCGGCTGCG GGCGGCAATG
GCCGACGGTT CTCAGCGGAC CGTCTCCGGC ACGCTGTCCG GGCCCCGGCA GGTGGCCAAG
CTGATCGAGA TCAACGGGCG CCACTTCGAC CTGCGGGCCG AGGGCAACCT GCTGGTCTTC
GCCTACGGTG ACCGGCCCGG CGTGATGGGC ACCATCGGCG CGCTGCTCGG CGAGCAGGGC
ACCAACATCG AGGCGGCCCA GCTGTCCCAG GAGCTGGACG GCCACGCGGC GATCATGGTG
CTGCGGGTGG ACCGGCTGCC CGACCAGGCC CTGCTCGACA GGATCGGTGC CGCGATCGAG
GCCATCCAGG TGCGGGGCAT CCCGGCCGAG TGA
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| Protein sequence | MPKPVVLIAE QLAQSALDVL GSEVEIRHVD GADRSALLPA LKDADAVLIR SATTMDAEAL
AAAPQLKVVA RAGIGLDNVD VPAATAKGVL VVNAPQSNII TAAEHAIALL LSVARKIPAA
DASFRAGEWK RSKFTGVEIA DKTVGVVGLG RIGQLFAARI AAFGTSVIAY DPYLQPARAA
ALGVRLVDLP TLLATADIIS IHLPRTPETL GLIGAAELAT VKPGVIIVNA ARGGLIDEQA
LADALTEGRV AGAGLDVFVN EPLGADSPLR TAPNTVLTPH LGASTNEAQD KAGTAVARSV
KLALRGDFVP DAVNVQAAGP VSDELQPWIP LVSRLGTILT AVTGGVPSQV SVEVRGDLAA
MDTSILQLAA VRGIFGSVIT DAVTFVNAPA LAAEHGLTLT GESTEEIGDF RSSVRLRAAM
ADGSQRTVSG TLSGPRQVAK LIEINGRHFD LRAEGNLLVF AYGDRPGVMG TIGALLGEQG
TNIEAAQLSQ ELDGHAAIMV LRVDRLPDQA LLDRIGAAIE AIQVRGIPAE
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