| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1466 |
|---|
| Symbol | |
|---|
| ID | 8447062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1618774 |
|---|
| End bp | 1620627 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645040595 |
|---|
| Product | acetolactate synthase, large subunit, biosynthetic type |
|---|
| Protein accession | YP_003200854 |
|---|
| Protein GI | 258651698 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0931966 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0742245 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGG GTCGCACCGC AGAACGCCTG GCTGTCATAC CGCCCGCCGG CCCGCAGGCC
GGGGCAAGCG CCGGCTCGAG CGCTGCCTCG AGTTCAGCGA CGACCCGCAC GGTTGAGCGG
GTGACCGGCG CCAAGTCGGT CGTCCGATCC CTGGAAGAAG CGGGCGTCGA CGTCGTCTTC
GGCATCCCCG GCGGCGCGGT GCTGCCGGTC TATGACCCGT TGCTGGACTC CACCAAGGTC
CGCCACGTGC TGGTCCGCCA CGAGCAGGGT GCCGGGCACG CGGCCACGGG ATACGCACAG
GCCAGCGGTC GGGTCGGGGT CTGCATGGCG ACCTCCGGGC CCGGCGCGAC CAACCTGGTC
ACCCCGATCG CCGACGCGCA GATGGACTCG GTGCCGATGG TGGCCATCAC CGGCCAGGTC
GGCCGATCGA TGATCGGCAC CGACGGCTTC CAGGAGGCCG ACATCTGCGG CATCACGATG
CCGATCACCA AGCACAACTT CCTCGTCACC GATCCGGCCG AGATCCCACA AACGATCGCG
GCCGCGTTCC ACCTGGCAGC AACCGGCCGA CCCGGTGTTG TCCTGGTGGA CATCCCCAAG
GACGTCCTGC AGTCGGAGAC CACCTTCGTC TGGCCGCCGG ATGTCCATCT CCCGGGTTAC
CGGCCGACCA TGCGGCCGCA CGCGGGACAG ATCGCCGCCG CCGCGAAGCT CATCGCGTCT
TCGCGTCGTC CGGTGCTCTA CGTCGGTGGT GGGGTGTTGA AGGCTCGGGC GACCGAGTCC
CTTCGACAGC TGGCCGAGTC GACCGGTATT CCGGTCGTCA CCACGCTCAT GGCCCGCGGC
GCGTTCCCCG ATTCGCACAT CCAGCACCTG GGGATGCCGG GGATGCACGG CACCGTGGCG
GCAGTGGCGG GTATGCAGCG GGCGGACCTG ATCATCGCCC TCGGCGCCCG GTTCGACGAT
CGGGTCACCG GCCAGCTTTC GACCTTCGCG CCCGGCGCGA CCGTCATCCA CGCCGACATC
GACCCGGCCG AGATCGGTAA GAACCGGGTC GCCGACGTGC CCATCGTCGG TGACGTCGGC
GAGGTGATCG CCGACCTGGT GGTCGCCGTC GCCGCCGAGC AGGCCTCCGG CGTGGTCGCG
GATCTCACCG CCTGGTGGGC CGAGCTGGAC GACTTCCGGG AGACCTTCCC GCTGGGGTAC
GACTGGCCGG CCGACGGCTC GCTCTCGCCG CAGTACGTGA TCGAACGGCT CGGCGCCATT
GCCGGTCCGG ACGCGATCTA CGCGGCCGGT GTCGGCCAAC ACCAGATGTG GGCGGCCCAG
TTCATCAAGT ATGAAAAGCC TTTCACCTGG CTGAATTCGG GCGGTCTGGG CACCATGGGC
TACGCGGTGC CGGCGGCGAT GGGGGCCAAG ATGGGCCGGC CGGACGCGGT TGTCTGGGCG
ATCGATGGCG ACGGCTGCTT CCAGATGACC AATCAGGAGC TGGCCACCTG CGCGATCGAG
GGCATCCCGA TCAAGGTCGC CATCATCAAC AACGGCAACC TGGGCATGGT CCGGCAGTGG
CAGACGCTGT TCTACGGCGA GCGCTACTCG CAGACCGACC TGGGCACGCA CAAGCACCGC
ATCCCGGACT TCAAGATGCT GGCCGAGTCC TACGGCTGCG TCGGGCTGCG CTGCGAGTCC
AAGGAGGACG TCGACAAGAC GATCCAGGCG GCGATGGAGA TCAACGACCG GCCGGTCGTG
GTCGACTTCA CCGTCGGGGC GGACGCCCAG GTGTGGCCGA TGGTCGCCGC CGGTACCGGC
AACGACCAGA TCATGGCCGC CCGCGGCATC CGCCCACTCT TCGACGAGGA GTGA
|
|---|
| Protein sequence | MTQGRTAERL AVIPPAGPQA GASAGSSAAS SSATTRTVER VTGAKSVVRS LEEAGVDVVF
GIPGGAVLPV YDPLLDSTKV RHVLVRHEQG AGHAATGYAQ ASGRVGVCMA TSGPGATNLV
TPIADAQMDS VPMVAITGQV GRSMIGTDGF QEADICGITM PITKHNFLVT DPAEIPQTIA
AAFHLAATGR PGVVLVDIPK DVLQSETTFV WPPDVHLPGY RPTMRPHAGQ IAAAAKLIAS
SRRPVLYVGG GVLKARATES LRQLAESTGI PVVTTLMARG AFPDSHIQHL GMPGMHGTVA
AVAGMQRADL IIALGARFDD RVTGQLSTFA PGATVIHADI DPAEIGKNRV ADVPIVGDVG
EVIADLVVAV AAEQASGVVA DLTAWWAELD DFRETFPLGY DWPADGSLSP QYVIERLGAI
AGPDAIYAAG VGQHQMWAAQ FIKYEKPFTW LNSGGLGTMG YAVPAAMGAK MGRPDAVVWA
IDGDGCFQMT NQELATCAIE GIPIKVAIIN NGNLGMVRQW QTLFYGERYS QTDLGTHKHR
IPDFKMLAES YGCVGLRCES KEDVDKTIQA AMEINDRPVV VDFTVGADAQ VWPMVAAGTG
NDQIMAARGI RPLFDEE
|
|---|
| |