Gene Namu_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1443 
Symbol 
ID8447039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1596641 
End bp1597843 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content73% 
IMG OID645040574 
ProductCysteine desulfurase 
Protein accessionYP_003200833 
Protein GI258651677 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.751675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.957597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTACC TCGACCATGC CGCGACCACG CCGGTTCTGC CGGAGGTGAT CGCCGCGATC 
TCCCAGGCGA TGACCCTGAC CGGCAACGCC TCGTCGCTGC ATACCTCCGG ACGGGCGGCC
CGGCGCCGGA TCGAGGAGTC CCGTGAGGCC ATTGCCGCGG CCCTCGGCGC GCGGCCGAGC
GAGGTCGTCT TCACCTCTGG GGGTACCGAA TCCGACAATC TCGCGGTTGC CGGCATCTAC
CGGGCGCGGG TCGCGGCCGA TCCTCGCCGC CACCGCATCA TCGCCCCGGC CATCGAGCAC
CATGCGGTGC TGGATGTGAT CGAGCACCTG GTCGCCGACG CGGGCGCGGC CGTCACCTGG
CTGGAGGTCG ACGACTTCGG TCGAGTGCAC GCGGACACGC TGGCCGCGGC CATCGCGGAG
AATCCGGCGG ACGTGGCCCT GGTCACCGTG ATGTGGGCCA ACAACGAGGT CGGCACGGTC
AACCCGATCC GCGAACTGGC CGCGGTCGCC CACACGCAGG GCATTCCGTT CCACACCGAC
GCGGTGCAGG CGATCGGCCA GGTTCCGGTC GACTTCGCCC GCAGCGGCGT GGACGCGGTG
ACCGTCACCG GCCACAAGAT CGGAGGTCCG GTCGGCGTGG GCGCCCTGCT GGTGCGCCGG
GACACCCCGG TGGCGCCGAT CATGTTCGGC GGCGGTCAGG AGCGATCCAT CCGGTCGGGC
ACCCTGGACA AGGCGGGAAT CATCGGTCTG GCCGTCGCCG TGCAGGACGC GGTCGCCCAT
CGGGCCGAAC GCGCGGTGGC CCATGCGGCC CTGCGGGACG AGCTGATCCG GGCGGTCACC
GCGCAGGTGC CCGACGTCCT GCTCTCCGGA GACCCGGGGG CCGGGCTGAT GGACGGGGGG
CCGTCCCGGC TGCCCGGGAA CGCGCATCTG CGCTTCCCCG GGTGCGAGGG CGATTCGTTG
TTGATGCTGC TCGACGCCGC CGGGATCGAA TGCTCGACCG GGTCGGCCTG CACCGCGGGC
GTGGCCCGGC CCTCGCACGT GTTGCTGGCC ATGGGCCTGC CCGAGCCGGA CGCGCGGGCC
TCACTGCGGT TCACCTTCGG GCACACCTCG ACGATCGACG ACGTGACGGC CGTGGCCCAG
GCCATCGGCC CGGCGGTGCA GCGATCCCGG CGGGCGGCGC TGGCCGGCGC CCGGCGTCGC
TGA
 
Protein sequence
MTYLDHAATT PVLPEVIAAI SQAMTLTGNA SSLHTSGRAA RRRIEESREA IAAALGARPS 
EVVFTSGGTE SDNLAVAGIY RARVAADPRR HRIIAPAIEH HAVLDVIEHL VADAGAAVTW
LEVDDFGRVH ADTLAAAIAE NPADVALVTV MWANNEVGTV NPIRELAAVA HTQGIPFHTD
AVQAIGQVPV DFARSGVDAV TVTGHKIGGP VGVGALLVRR DTPVAPIMFG GGQERSIRSG
TLDKAGIIGL AVAVQDAVAH RAERAVAHAA LRDELIRAVT AQVPDVLLSG DPGAGLMDGG
PSRLPGNAHL RFPGCEGDSL LMLLDAAGIE CSTGSACTAG VARPSHVLLA MGLPEPDARA
SLRFTFGHTS TIDDVTAVAQ AIGPAVQRSR RAALAGARRR