Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1434 |
Symbol | |
ID | 8447030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1587961 |
End bp | 1589529 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645040565 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003200824 |
Protein GI | 258651668 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATCCGG ACGTGCTGGT GCTCGGCGGC GGTCACAACG GTCTGGTGGC CGCGATTCTC GCGGCCACCG CCGGCCGGAC GGTGACCCTG CTGGAACGTT CGGCGGCCCC GGGCGGGGCG ACGGTGGGCG AGCGGGTGTT CCCGCCGCAT CCGGTGCGGC TCTCCCGGTA CTCGTATCTG GTGGCGCTGA TGCCGGACGA GCTGATCCGC CGGCTCGGTG TCGCCGTACC GCTGGCCTCG CGGGCGGTCT CGTCCTACAC GCCGGTGATG CGCGGCGGGG CCGCCACCGG ACTGCTGGTC GAGCGCAACC TGGGGTCACG CACGGAGGAC TCGTTCCGCG AGGTCACCGG TTCGGACGAG GACTTCGCGG CCTGGCGGGA GCTGTACGGG CAACTGCACA CGCTGGCCGG GGTGGTCGCC CCGGCGCTGA CCGGCCCGCT GCGCCGGCGC AGCGAGGTAG CCGACGCGGT CGTCGCGGCG GCCGGTTCGC AGCTATGGAC CGACCTGGTC GAGCAGCCGC TCGGCGCCAT GATCGAGCGG CGCTTCCGGG ACGACACGGT GCGCGGGGTG GTGGCCACCG ACGGTTTGAT CGGCACCCAC ACCTCGTTGT TCGCGCCGGA GCTGCTGGCC AACCGGTGCT TTCTGTATCA CCTGATCGGG CGGGGCACCG GTGAATGGCT GGTCCCGATC GGCGGAATGG GGGCGCTGAC CGACGCCCTG ATTCGCCGGG CCCGCCAGCT CGGCGTCGAG ATCCAGGCCG GCACCGAGGC GATCGCCATC GACGAGGGCG CGACACAGGT GACGGTCACG GCCGAGCGGG ACGGTGAGCA GGTCACCTTC CAGGCCGCGC ACGTGCTCGC CGCGATCGCC CCGGCGGTCC TTGATCGGTG CCTGGGCCGG GAGGCCGAGG ATCCGGTCGG CGCCCAGGTC AAGATCAACA TGTTGCTGGA CCGGTTGCCC CGGCTCAAGT CCGGGATGGA CCCGCGGGTG GCCTTCGCCG GCACCATGCA TCTGAACGAG GAACTGTCCG AGCTGGAGGC CGCGCACGCA ATCACCGCCG CCGGCAGCCT GCCGGCGATG GTGCCGTCCG AGGTGTACTG CCATTCGCTG ACCGACCCGT CGATCATGAA CGGGCATCCG GGGGCAACGC TGACCCTGTT CGGGCTGCAC ACTCCGGTCG GGCTGTTCCG GGAGAATCCC GACCAGGCCC GGTCGGCCGC CGCCCAGGGG GCGCTGATCG CCCTGCAGCA GCACCTGGCC GAACCGCTGC TGGACTGCCT GGCCCGGGAC GAGCACGGCG AGCCCTGCGT CGAGGTCGCC ACCCCGGTCG ACCTGGAGCG CAGCCTGGCG ATGCCGGGCG GCAACATCTT TCACGACGAC CTGAGCTGGC CCTGGCTGGC CGACGGGTTC CCGGCCGAGA CTCCGGCCGC CGCCTACGGC GTCGAGGTTC CCGGATCACG CCGGATCCTG TTGGCCGGGG CCGGATCCCG GCGCGGTGGG GGAGTGTCGG GACTCGGCGG CCTGGCCGCC GTCGAAGCGT TGCTGGAGCT GACGGGAGAG CACGGGTGA
|
Protein sequence | MNPDVLVLGG GHNGLVAAIL AATAGRTVTL LERSAAPGGA TVGERVFPPH PVRLSRYSYL VALMPDELIR RLGVAVPLAS RAVSSYTPVM RGGAATGLLV ERNLGSRTED SFREVTGSDE DFAAWRELYG QLHTLAGVVA PALTGPLRRR SEVADAVVAA AGSQLWTDLV EQPLGAMIER RFRDDTVRGV VATDGLIGTH TSLFAPELLA NRCFLYHLIG RGTGEWLVPI GGMGALTDAL IRRARQLGVE IQAGTEAIAI DEGATQVTVT AERDGEQVTF QAAHVLAAIA PAVLDRCLGR EAEDPVGAQV KINMLLDRLP RLKSGMDPRV AFAGTMHLNE ELSELEAAHA ITAAGSLPAM VPSEVYCHSL TDPSIMNGHP GATLTLFGLH TPVGLFRENP DQARSAAAQG ALIALQQHLA EPLLDCLARD EHGEPCVEVA TPVDLERSLA MPGGNIFHDD LSWPWLADGF PAETPAAAYG VEVPGSRRIL LAGAGSRRGG GVSGLGGLAA VEALLELTGE HG
|
| |