| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1429 |
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| Symbol | |
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| ID | 8447025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 1580561 |
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| End bp | 1584415 |
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| Gene Length | 3855 bp |
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| Protein Length | 1284 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645040560 |
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| Product | ABC transporter related |
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| Protein accession | YP_003200819 |
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| Protein GI | 258651663 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.442581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGTCGG TGCTCGCGGT TACCGTGTCG CTTGTGCCAC CGACCACCAC CACCGCACCC
TCCGGGGCCG CCCGCACCGA CGTCCGCGCC CCGAACCGCG GCGAACCGGC CGGCGGGTGG
CTGCGGCGGC TGTGGGGCTA CTGCTGGCGG CACCCGGTCA TCACGGTCCT GGCCGGTCTG
GCCGCCGTCG GTGGCGTCGG GCTCGGCGCG CTGACCCCGC TGCTCACCCA GGTCGCGGTG
GACGACGCCA CCGCCGGCAC CACGGCGAAC CTGGGCTGGG TGATCGCCGG GCTGGTCGCG
CTGGCCCTGA TCCGGTTCGG CTCCTCGTTC CTGCGACGCT GGGCCGGCGG CCGGCTGTCC
TTGGACGTGC AGCACGATCT GCGGCAGGAC GTGTTCGGCG CATTGCAGGG GCTGGACGGC
TCCGGGCAGG ACCGGCTACG CACCGGCCAG GTGGTCTCCC GGGCCAACAC CGACCTGCAG
ATGGTGCAGT CGCTGCTGGC CATGATCCCG CTCTCGGCCG GCCAGGTGGT CCTGTTCGTC
GTCTCGCTGG TCATCATGGC CGTGCTGTCC CCGCTGCTGA CCGTGATGGC GTTGCTAGTG
GTGCCGGCCG TCGTGCTGGT CACCCGGCTG ACCCGCACGA AGCTGTTCCC GGCCACCTGG
GCGGCCCAGC AGTCGGCGGC CGAGGTCGCC GAGATCGTCG AGGAGGACGT CACCGGCGTC
CGCGTGGTCA AGGCCTTCGG GCAGGAGGAC CGGGAGCTGG CCCGGCTCAC CGCCGGCGCC
GGCGCACTGT TCGCGACCCG GATGCGCGCG GTGCGCAGCG CGGCCGCGAT CAGCCCCGCG
CTGCAGGCCC TGACCGCCCT GGGCCAGGTC GGCGTGCTGG CCCTGGGCGG GTACCTGGCG
CTGAACGGGA CCATCACCCT GGGCACTTTC CTGGCCTTCA CCCTCTATCT GGCCCAGCTC
GTCGCCCCCA CCCGGATGCT GACCATGCTG CTGGTGCTGG GTCAGCAGGC CCGGGCCTCG
GTCGAGCGGG TGCTGGAGAT CGTCGACTCG CTGCCCGAGA TCACCGAACC GGCCGAGCCC
ACCCCGCTGC CGCCCGGACC GGTGGCCGTC CATCTGCGCG ACGTGCGGTT CGGCTACCAG
GCCACCGAGC CCGTGCTGGA CGGCTTCGAC CTGCCGGTGC CGGCCGGGGC CACGGTCGCC
CTGGTCGGGC CGTCCGGTTC CGGCAAGTCG ACCGTGTCGC TGCTGCTGCC CCGGTTCTAC
GACCCGCAAC ACGGCACCGT CGAGGTCGGC GGGGTCGACG TGCGCGAGCT GGATCTGACC
GAGCTGCGCA CCGCGGTCGG GGTGGTCTTC GAAGAGGCGT TCCTGTTCTC CAACACGATC
GCCGCCAACA TCGCCTACGG CCGGCCGGAC GCCACCGACG CCGACATCCG GGCCGCCGCG
CAGGCGGCCG AGGCCGACGA GTTCATCGCG GCCCTGCCCG ACGGGTACGA CACGGTGATC
GGCGAACGCG GGCTGACCCT GTCCGGCGGC CAGCGGCAGC GGCTCGCCCT GGCCCGCGCC
CTGCTCACCG ACCCCCGGGT ACTCGTGCTC GACGACGCCA CCAGTGCCGT CGATCCGGCC
ACCGAGGCGG CGATCCACGC CACGCTGCAC CGGGTCACCG AACACCGCAC CACGATTCTG
ATCGCCCACC GCCGGTCCAC CCTGTCCCTG GCCGACCGGA TCGCCGTCGT CGTCGCCGGC
CGGGTCGTCG ACCTGGGCAC CCACGCCGAA CTGGTCGGGC GCTGCGCCGA CTACCGGCGG
CTGTTGGGCA GCGACCTGGC CGGGGATGCC GCCCCAGCGC CGGACGGCGG CTGGACGGCC
GGCCCCGACG GGATCACCCC GGAGCTGTGG CCCGCCGTCG ATGCGTCCGC CGAGGCCGAG
GCCGAGCTGG TCCGGGCCGG CGAACAGGCC CTGCGAGCCA CCCAGAGCGC CGGACCCCGT
CTGCGGGGCG GGGGCGGCCG GGGCGGCGGT GCCGCCGGGG GCGGCTTCAC CGGGATGCTC
GGGGCGGTGC CGCCGACCGC GGAACTGCTG AACCAGGTCG CGTCGTTGCC GCCGGCCACC
GACCGCCCGC AACCGGTCGC CCCGGAGACC GGCCCGTTCA GCCTGCGCCG GACGCTGCGG
CCGGTCCGCG GCCTGCTGAT CGTGGCGTTC CTGCTGGTCG CCGCGGACGC CGCGGCCAGC
GTGCTGCTGC CGATCCTGAT CCGTTACGGC GTGGACCACG GCGTCTCCGA CGGGTCGGTC
CAGGTGGTGC TGGGGGCGGC CGGCGTGGCG CTGCTGCTGG TCGGCGCCGA CTACCTGATC
CAGCGCTGGC AGCAACTGGC CGCCGGCCGG GCCGGCGAGA ACGTGCTGTA CCGGCTGCGG
TTGCGCGAGT TCGGCCACCT ACAAAAGCTC GGGTTGGACT ACTACGAGCG GGAACTGGCC
GGCCGGATCA TGACCCGGAT GACCACCGAC GTCGACGCGC TGTCCAGCTT CCTGCAGACC
GGGCTGGTCA CCTCGGTCGT GTCCCTGGCC ACCTTCTTGG GCATCGCCGT GGTGCTGGTG
CTGATGGACG TCGGGCTGGC CCTGATCGCG TTCCTGGCCC TGCCGCTGGT CGCCGTGGCC
ACGGTGATCT TCCGGCGGTT CTCCACCCGC GCGTACCACG ACGCCCGGGA GAAGGTCGGC
ATCGTCAACG CCGATTTGCA GGAGAACGTC GCCGGGCTGC GGGTGTCCCA GGCGCTGGGC
CGGCAGAAGG TCAACGCCGA GGGCTTTTCC GCGCGCAGCG ACGACTACCG GCGCAGCCGG
ATGCGGGCGC AGACCGCCAT CTCCATCTAT TTCCCCTTCG TCGCCCTGCT TTCGGAACTG
GCGGCCGCCG CGGTCCTGGG CTCCGGGGTG CTCCGGGTGA TCGCCGGGAC CATGACGGTG
GGCACGCTGA TCGCCTTCGT GCTCTACCTG GACAGCTTCT TCACCCCGAT CCAGCAGCTG
TCCCAGGTGT TCGACTCCTA CCAGCAGGCC CAGGTCGGCC TGCAGCGCAT CGGCGAGCTG
CTGGACACCC CCACCTCGAC CGCGGCGGCC GAGCATCCGC AGCCGCTTCC CGACCGGCTC
GGTGATCTGG CCACCGAGCG GATGGGCTTC CGCTATGCGA GCACCACCAC CCCGGCCCTG
GACGGGGTCG ACCTGACCTT CGTACCGGGG CAGACGGTTG CCGTGGTCGG CTCGACCGGG
GCCGGCAAGT CGACCCTGGT CAAGCTGCTG GCCCGGTTCT ACGACCCGAC CTCGGGCGCG
GTCACCGCCG GCGGCACCGA CGTGCGCCGG TTCGACCTGG GCGGCTACCG GCGGCGACTG
GGCGTCGTTC CGCAGGAGCC GCACCTGTTC ATCGGCAACG TCCGGGACAA CATCGCCTAC
GGCCGGCCGG AGGCCACGGA CGCGCAGGTC GAGGCGGCCG CCCGGTCGGT CGGCGCACTG
ACCGCCATCG GCGCGCTCAC CGGCGGGTTC CATCATCCGG TGGACGAGCG TGGCCGCAAC
CTGTCCGCAG GGCAACGGCA GCTGATCTCG CTGGCCCGCG CCGAGCTCGT CGATCCCGAG
ATCCTGCTGC TGGACGAGGC GACGGCGGCG CTGGACCCGG CCGCCGAGAG CGCGGTCCTG
GCCGCCACCG ACCGGCTCGC CCGGGGCCGC ACCACGGTGG TGGTGGCCCA CCGGCTGACC
ACCGCGGCGC GGGCCGATCG CATCGTGGTG ATGGCCCACG GGCGGGTGGT GGAGACCGGG
CGGCACGACG AACTCCTGCG GCGCGGCGGG GCCTACGCCC GCCTGTACGC CGAACAGAGC
CCGTCAAGTG GGTGA
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| Protein sequence | MLSVLAVTVS LVPPTTTTAP SGAARTDVRA PNRGEPAGGW LRRLWGYCWR HPVITVLAGL
AAVGGVGLGA LTPLLTQVAV DDATAGTTAN LGWVIAGLVA LALIRFGSSF LRRWAGGRLS
LDVQHDLRQD VFGALQGLDG SGQDRLRTGQ VVSRANTDLQ MVQSLLAMIP LSAGQVVLFV
VSLVIMAVLS PLLTVMALLV VPAVVLVTRL TRTKLFPATW AAQQSAAEVA EIVEEDVTGV
RVVKAFGQED RELARLTAGA GALFATRMRA VRSAAAISPA LQALTALGQV GVLALGGYLA
LNGTITLGTF LAFTLYLAQL VAPTRMLTML LVLGQQARAS VERVLEIVDS LPEITEPAEP
TPLPPGPVAV HLRDVRFGYQ ATEPVLDGFD LPVPAGATVA LVGPSGSGKS TVSLLLPRFY
DPQHGTVEVG GVDVRELDLT ELRTAVGVVF EEAFLFSNTI AANIAYGRPD ATDADIRAAA
QAAEADEFIA ALPDGYDTVI GERGLTLSGG QRQRLALARA LLTDPRVLVL DDATSAVDPA
TEAAIHATLH RVTEHRTTIL IAHRRSTLSL ADRIAVVVAG RVVDLGTHAE LVGRCADYRR
LLGSDLAGDA APAPDGGWTA GPDGITPELW PAVDASAEAE AELVRAGEQA LRATQSAGPR
LRGGGGRGGG AAGGGFTGML GAVPPTAELL NQVASLPPAT DRPQPVAPET GPFSLRRTLR
PVRGLLIVAF LLVAADAAAS VLLPILIRYG VDHGVSDGSV QVVLGAAGVA LLLVGADYLI
QRWQQLAAGR AGENVLYRLR LREFGHLQKL GLDYYERELA GRIMTRMTTD VDALSSFLQT
GLVTSVVSLA TFLGIAVVLV LMDVGLALIA FLALPLVAVA TVIFRRFSTR AYHDAREKVG
IVNADLQENV AGLRVSQALG RQKVNAEGFS ARSDDYRRSR MRAQTAISIY FPFVALLSEL
AAAAVLGSGV LRVIAGTMTV GTLIAFVLYL DSFFTPIQQL SQVFDSYQQA QVGLQRIGEL
LDTPTSTAAA EHPQPLPDRL GDLATERMGF RYASTTTPAL DGVDLTFVPG QTVAVVGSTG
AGKSTLVKLL ARFYDPTSGA VTAGGTDVRR FDLGGYRRRL GVVPQEPHLF IGNVRDNIAY
GRPEATDAQV EAAARSVGAL TAIGALTGGF HHPVDERGRN LSAGQRQLIS LARAELVDPE
ILLLDEATAA LDPAAESAVL AATDRLARGR TTVVVAHRLT TAARADRIVV MAHGRVVETG
RHDELLRRGG AYARLYAEQS PSSG
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