Gene Namu_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1397 
Symbol 
ID8446993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1547616 
End bp1549154 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content76% 
IMG OID645040528 
ProductFHA domain containing protein 
Protein accessionYP_003200787 
Protein GI258651631 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0172432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.166225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGCT TCGACGAGAT CCACGGCGAG GTCCTGCCGG CCGGCGACGG ACCGTCCCAT 
CTGGTGGCCC GCGTGCCCGG CGTGGTCACC GTGATCCGTC GGGACGCCGC GGGCGGCGAG
GCGGCGGCCG CCGAACTGCT GGAGTTGATC CGGCAGGCCG CGGCCGAAGC GGCGCCGGCC
CCCGGCCGCG ACCTGGCCCG CCGGCTCACC GAATGGGTGG TGCGAACCCG CGCGGTGCCC
GGCTTCGGCA CCATCGCCGC CACCGACGAC GGCATCGCGG TCTTCCTGCA CGGTGACGTC
ACCGTGGCCG AGCTGCCCGC GCCGGGCACC GCCGGCGCAC CCGCGGCCGA GCCGTTGCAC
CTGTCCGGCC GGACGGCGGC ATTCACCGTC GACCGGCTGC TGCCGCGACC GGCCGGCCCG
ATCGTGCTGA CCGCGGGCGA CCCGGACCGG CGACCGGCCG ACCCGTCGAT CGGTATGCCC
GGCTGGTCCG GGCTGGTCCA GGGCCTGGTC CCGGGCGTCG GGATCGTGCT GGGGGCGCCG
GCCGCCACCC CTGCGGCCGC ACCGGCCCCC GGCCGGCATG CCTCCCGGTC GGTGCCGGCG
CCGACCGCCG AACCCGAGGC CACCCAGGAG CAGCCGGCCG CCCGCCCGAG CCGGGAGCCG
ACCGCCGAGC ATCCGGTTCC GGACCGGGCC GCCGAGCCGG AGCCGGTGCC GGTGGCCGAG
CCCCCGCGGC CGCCGTTGCC CCGGGCCGAT GCCCGCAAGT TCGTCAGCAC GCCGCTGGGC
CCCCCGGCCA CTCCTCCAGC CCCGCCCAGC CCACCCCCGA GCAGCCCACC GCCCAGCAGC
CCACCTCCTA GTAGCCCGCC GCCCAGCCCG CCCAGCTCGG CGCCCAGTTC GCCGCCGCCG
GCCCCGCCCA GCGACGAACC GGTCAAGTTG CGACCACCGC GGCTCTCCGA GCAGATCTTC
GGTGCCCACC AGCACGAGAC ACCGCGGCCG CCGCTGCCGG TGCCGGGCGC CGGCGGGACG
GCCAAACCGG CCCCGCCCCG ACCCGGTGCC GCCGGCCCCG CCCACGTGCT GGTCAAGGGG
TTCCGCTGTT CCCGCAACCA CCACAACGAC CCGCGGGTCT CGTTCTGCTC GGTCTGCGGG
ATCCGGATGG ACCAACGCAC CGGGATCCTG GTGGACGGCC GGCGACCTCC GCTGGGCCTT
CTCGTCCTGG ACATCGGATC GACGTTCGTA CTGGACGACA ACTACCTGCT GGGCCGCAAT
CCCGAGGTCG ACGAGGCGGT GATCTCCAGC CAGCTGCGGC CGATCCGGCT GGACGACGAC
AGCGGCACGC TGTCCCGGGT GCACGCGGAG ATCCGGTTGG AGGGCTGGGA CGTGCTGCTG
CTCGATCGCG GCTCGGCCAA CGGCACCCAT GTGGCCGCGC CCGGCCAGTC CGGCTGGAAC
CGGCTCGCCC CGCACCGGCC GATCGTGCTC ACCCCGGGCA CCCACGTACG GATCGGCCGC
CGGGTGTTCA CCTTCGAATC CGCGCACGCC CGGCTCTGA
 
Protein sequence
MISFDEIHGE VLPAGDGPSH LVARVPGVVT VIRRDAAGGE AAAAELLELI RQAAAEAAPA 
PGRDLARRLT EWVVRTRAVP GFGTIAATDD GIAVFLHGDV TVAELPAPGT AGAPAAEPLH
LSGRTAAFTV DRLLPRPAGP IVLTAGDPDR RPADPSIGMP GWSGLVQGLV PGVGIVLGAP
AATPAAAPAP GRHASRSVPA PTAEPEATQE QPAARPSREP TAEHPVPDRA AEPEPVPVAE
PPRPPLPRAD ARKFVSTPLG PPATPPAPPS PPPSSPPPSS PPPSSPPPSP PSSAPSSPPP
APPSDEPVKL RPPRLSEQIF GAHQHETPRP PLPVPGAGGT AKPAPPRPGA AGPAHVLVKG
FRCSRNHHND PRVSFCSVCG IRMDQRTGIL VDGRRPPLGL LVLDIGSTFV LDDNYLLGRN
PEVDEAVISS QLRPIRLDDD SGTLSRVHAE IRLEGWDVLL LDRGSANGTH VAAPGQSGWN
RLAPHRPIVL TPGTHVRIGR RVFTFESAHA RL