Gene Namu_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1393 
Symbol 
ID8446989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1541063 
End bp1541851 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content71% 
IMG OID645040524 
Productprotein of unknown function DUF159 
Protein accessionYP_003200783 
Protein GI258651627 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.12322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0795799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGCC GTTACGCGTT GACGATGGAA CCGGAGGCCC TGTACGGCAC CTTCGACGCC 
GAGCCGGACG AGCACGCCGG AGGCGCCTCG GGCCTGTACG GGGGTGATCC GGTCCGTCCC
CGGTACAACA TCGCCCCGAC CCTGACCGTG CCGGTGGTGC GGCTGGAGCC ACGGGTCGCC
CCGGAGGACG CCGCCCGGCA GATCGAACCG ATGCGCTGGG GCCTGGTGCC CTCGTGGGCC
AAGGATCTCT CGGTCGGCAA CCGGATGTTC AACGCCCGCG TCGAATCGCT CGGTGCGAAG
GCGGCGTTCC GGACCGCGCT GATCAAGCGG CGCTGCCTGA TCCCGGCCAG CGGGTATTAC
GAGTGGCGGG TGCTCGGCGA CGAGACCGTC CGGGGTCGCC GGCGGCCGGT CAAGCAGGCT
TACTACCTCA CGCCGCAAGA CGGCAGCGTG ATGGCCTTCG CCGGGTTGTG GGAGTACTGG
CGGCCGGCCG GGGCCGAGTC CGGTCAGGGC GTGGTGTCCA TGACGATCAT CACCGCCCCC
GCCGTGGGCG CGATGCGGGA GATCCACGAA CGGATGCCGC TGGTCCTGCC GGCCTCGGAG
TGGGCGGCCT GGCTGGACCC GCGGGTCGAT CCGGCCCCGA TGCTCGGCCC ACCCCCGGAC
GAGCTGGTCG CGGCGATCGA ACGGCGCCCG GTGGGTCCCC AGGTGGGCAA CGTCGCCAAC
GATGACCCCG GACTGATCGC CCAGGTGGCG CAATTGACCG AGCCGGTGGA GCAACCGACC
CTGCTCTGA
 
Protein sequence
MCGRYALTME PEALYGTFDA EPDEHAGGAS GLYGGDPVRP RYNIAPTLTV PVVRLEPRVA 
PEDAARQIEP MRWGLVPSWA KDLSVGNRMF NARVESLGAK AAFRTALIKR RCLIPASGYY
EWRVLGDETV RGRRRPVKQA YYLTPQDGSV MAFAGLWEYW RPAGAESGQG VVSMTIITAP
AVGAMREIHE RMPLVLPASE WAAWLDPRVD PAPMLGPPPD ELVAAIERRP VGPQVGNVAN
DDPGLIAQVA QLTEPVEQPT LL