Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1391 |
Symbol | |
ID | 8446987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1539935 |
End bp | 1540549 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645040522 |
Product | bifunctional deaminase-reductase domain protein |
Protein accession | YP_003200781 |
Protein GI | 258651625 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.942421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0216388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCGG GCCGGCCGCG CAGTCTGCCG GTCATGAGAA CACTGGCACT GGTCGAGTTC CTCACCGTCG ACGGCGTCAT GCAGGGGCTG GGATCGCCCG GGGAGGACAC CGACGGCGGC TTCACCCACG GCGGCTGGGG CACCCCGTAC GCTCCCGCGC TCGGTCAGGT GGTCGACCCC GGCGGGCTGG GCCGGACCAC CGGGTACCTG TTCGGGCGGC GCACCTATCT GAAGATGGCC GACTTCTGGC CGCACCAGGG CGACGACAAC CCGATCGCGG CGAGCATGAA CCACAGCCCC AAGTACGTGG TGTCCAACCA GCTGACCGAG GTGAACTGGG CCGGCACCAC GATCCTGACC GGCGACCCGG TGCCCGCCGT GCGAGAGCTC AAGGCCCAGG GCGAGGGCGA CATCACCGTG CTCGGCAGCG GCCACCTGGC CCGCACCCTG CTGGCCGCCG GGCTGGTCGA CGAGCTGCGG CTGTTCGTGC ACCCGCTGCT GATGGGCACT GGTAAGCGGC TGTTCGGTGA GCTGCCCGAC CCGCGGACGC TGACCCTGCA GACGGTGGCC CGGACCGACC TGGGCACGGT CGCCTTGGTC TACCGGATCG GTTGA
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Protein sequence | MSPGRPRSLP VMRTLALVEF LTVDGVMQGL GSPGEDTDGG FTHGGWGTPY APALGQVVDP GGLGRTTGYL FGRRTYLKMA DFWPHQGDDN PIAASMNHSP KYVVSNQLTE VNWAGTTILT GDPVPAVREL KAQGEGDITV LGSGHLARTL LAAGLVDELR LFVHPLLMGT GKRLFGELPD PRTLTLQTVA RTDLGTVALV YRIG
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