Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1385 |
Symbol | |
ID | 8446981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1528789 |
End bp | 1530672 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645040517 |
Product | secreted protein |
Protein accession | YP_003200776 |
Protein GI | 258651620 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.195328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000365007 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCGCTGA CCCGCATGCT CCGACTGTCC GTGCTCGTGG TGGCCGTGCT GGCCGCCACC CTGGTGGCGC CCGTCGCGAA CGCCGCCACC GGCGACCGTG GCTGGGGCGG TGGCGGCCAT GGTGGGAGCA GTGGCGGGGG CAGTGGACCC TGGCAACCCG ACCTGGGCCC GAACGTGACG ATCTTCGACC CGAGCATGTC GGCGGCCGAG ATCGAGGCCG CAGCGACAGC GGTCTTCAAC AAGCAGAAGA GCAACGAGTT CGCGGCCGAC CGGTTCGCGT TGCTGTTCGA ACCGGGCACC TACGGCAGTG CCACGGAGCC GCTGAATTTC GAGGTCGGCT ACTACACCAG CGTGGCCGGC CTGGGCCGGC TGCCCGGGGA CGTGATCATC AACGGAACGA TCAACGTCCA CAACCAGTGC TACGGCGACC ATTGCATCGC GCTGAACAAC TTCTGGCGCT CGCTGTCCAA CCTGACCATC GCGGTCACCG ACAAGCCGAC CGCCGGGTGC TACGCCGGCG AATTCTGGGC GGTGTCGCAG GCGGCGCCGA TGCGTCGGGT GCACGTCACC GGCGGCCAGA CCACGCTGAT GGACTACTGC ACCAATCCGT CCTTCGCCAG CGGCGGGTTC ATCGCCGACT CGAAGTTCGA CGGGACCGTG ATCAACGGCT CCCAGCAGCA GTGGATGACC CGCAACAGCA CGGTCAGCAC CTGGACCAAC GGCGTCTGGA ACCAGGTGTT CTCCGGCGTC GAGGGCGCCC CGGCCACCTG CTTCCCGGCG GCCACCGCCT GCGGCGGCCC GTACACCACG GTGGCCAAGA GTCCGGTGAC CAAGGAATCC CCGTTCCTGT ACCAGGACGA CCGCGGCCGG TACCGCGTGT TCGTGCCCGC CGTCCAGCGC AACAGCAGCG GCACCACATG GGCCTCCGGC AACCCCAAGG GCTCGTCCCA GTCGATCGAG AACTTCTACG TGGCCCGGCC GGGCGACGAC GCCCGCACGA TCAACGCCGC GCTGGCCCGC GGCAAGCAGC TGCTGCTCAC TCCCGGGGTC TACCAGCTCG ACCGGCCGAT CACCGTCACC CGGCCGAACA CGCTGATCCT CGGCCTGGGC TACGCGACCC TGATCCCCCA GAACGGCAAC GCGGCGATCA CCATCGGCGA CGTGCCCGGG GTGGACGTCG CCGGGGTGAC CATCGACGCC GGCCCGGTCA ACTCCCCCGT GCTCGTGCAG GTCGGCACGC CCGGCGGGCA GTGCAGCAGC AGCCGGGGCA ACCCCACCGT GCTGCACGAC GTGTTCGTCC GCATCGGCGG TGCCGCCGCC GGCCGGGCGA CCACCAGCAT CGTGGTGAAC AGCGACAACA CCATCCTGGA CAACATCTGG GCCTGGCGGG CCGACCATGG CAACGGGGTC GGCTGGACCG TGAACACGGC CGACACCGGG CTGATCGTCA ACGGGGACAA CGTCACCGCC TACGGCCTGT TCGTCGAGCA CTACCAGAAG ACCGAGACCA TCTGGAACGG CGACAACGGG CGGGTGGTGT TCTACCAGAA CGAGCTGCCG TACGACCCGC CGAACCAGGC GGCCTGGACC CAGCCCTCGG GTGAGCTCGG CTACCCGGCG CGGAAGGTGG CCGACGGCGT GCGCTCGTTC AGCGGGACCG GGATGGGCAG CTACAGCTTC TTCAACCAGG GTGTGGACGT CTACGCCGCC AACGCCTTCG AGGTGCCCAC CGGGCTCAAG GCCGGCAGCC TGACCAACCT GCTGACCATC TTCCTGGACC CGGCCAACGG CAAGGGCGGC ATCCAGAACG TCATCAACGG CGTCGGCGGG TCGTCCACCA TCGCCAACCC CGACGTCCCG GTCACCGTGG TCAGCTACCC ATGA
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Protein sequence | MALTRMLRLS VLVVAVLAAT LVAPVANAAT GDRGWGGGGH GGSSGGGSGP WQPDLGPNVT IFDPSMSAAE IEAAATAVFN KQKSNEFAAD RFALLFEPGT YGSATEPLNF EVGYYTSVAG LGRLPGDVII NGTINVHNQC YGDHCIALNN FWRSLSNLTI AVTDKPTAGC YAGEFWAVSQ AAPMRRVHVT GGQTTLMDYC TNPSFASGGF IADSKFDGTV INGSQQQWMT RNSTVSTWTN GVWNQVFSGV EGAPATCFPA ATACGGPYTT VAKSPVTKES PFLYQDDRGR YRVFVPAVQR NSSGTTWASG NPKGSSQSIE NFYVARPGDD ARTINAALAR GKQLLLTPGV YQLDRPITVT RPNTLILGLG YATLIPQNGN AAITIGDVPG VDVAGVTIDA GPVNSPVLVQ VGTPGGQCSS SRGNPTVLHD VFVRIGGAAA GRATTSIVVN SDNTILDNIW AWRADHGNGV GWTVNTADTG LIVNGDNVTA YGLFVEHYQK TETIWNGDNG RVVFYQNELP YDPPNQAAWT QPSGELGYPA RKVADGVRSF SGTGMGSYSF FNQGVDVYAA NAFEVPTGLK AGSLTNLLTI FLDPANGKGG IQNVINGVGG SSTIANPDVP VTVVSYP
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