Gene Namu_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1380 
Symbol 
ID8446976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1524281 
End bp1524844 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content68% 
IMG OID645040512 
ProductYceI family protein 
Protein accessionYP_003200771 
Protein GI258651615 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.181422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.385301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCT CCGTCACCAC CCCCACCCTC TCCGCCGGCA CCTGGGCGGC CGACGCCGTT 
CACTCCGACG TCTCGTTCAA GGTTCGGCAC ATGGCCGTCG GCAAGGCCAA GGGCACCTTC
GCGCTCAAGT CGGCCACCCT GGTCGTGGGC GCGAACGGCA TCGCCGACGC TTCCGTGACC
GCCGAGATCG ACGCCGCGAG CGTGGACACC AAGCAGGAGC AGCGGGATGC GCACGTCCGC
TCCGCCGACT TCCTGGATGT CGAGAACCAC CCGACCCTGA CCTTCGTCTC CAAGGCCGTC
AAGGACATCG ACGGCGAGGA GTTCGTGCTG GTCGGCGACC TGACCATCCG CGGCACCAGC
AACGAGGTCG AGCTGGCCAC CGAGTTCCTG GGCGAGACCG TCGACGCCTA CGGCCACACC
CGGGCCGGCT TCTCGGCCAA GACCAGCATC TCCCGCAAGG CCTACGGCGT GAGCTTCGAG
GCCGCCTTCG GTGCCGGCAA CGCGGTCGTG GCCGACAAGG TCGAGATCGA CCTGGAGCTG
GAGTTCGTCC GCAACGCCGA CTGA
 
Protein sequence
MTTSVTTPTL SAGTWAADAV HSDVSFKVRH MAVGKAKGTF ALKSATLVVG ANGIADASVT 
AEIDAASVDT KQEQRDAHVR SADFLDVENH PTLTFVSKAV KDIDGEEFVL VGDLTIRGTS
NEVELATEFL GETVDAYGHT RAGFSAKTSI SRKAYGVSFE AAFGAGNAVV ADKVEIDLEL
EFVRNAD