Gene Namu_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1374 
Symbol 
ID8446970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand+ 
Start bp1517978 
End bp1518622 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content74% 
IMG OID645040506 
ProductSAF domain protein 
Protein accessionYP_003200765 
Protein GI258651609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.109733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.485812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGC CGCCGGCGCC GTCCCCCCGT CGGCTGTCCC GTCCCCGGTG GTTCAACGTC 
CGGGTGGTGG GCGGCATCCT GCTGGTGATC GCGGCCATCG TCCTCGGGGC CCGGGTGATG 
GCCGCGGGAT CGCAGACCAC CCCGGTCTGG GCGGCGTCCC GGAGCCTGTC CGCCGGCACC 
GTCATCGGGG CCGGTGACCT GACCGCGGTC GAGGTCAATC TCGGCGACCA GGCCGGCGCC 
TACCTCACGC CCGCCGGCGA CTCACCGGTC GGCCGGACGC TGGTGGCCCC GCTGGGCGCC 
GGCGAGCTGC TGGCCGGATC GGCGGTCGAA CCGACGGACA GCGGCCGGGT GGTCTCCATC 
GCAGTGGCCC CCGAACACAT GCCGCCCGGG GTCGAGCACG GTGCCACCAT CGACCTGTAC 
CTGACCAGGG AGGCGAACCC GGGCTCGGCC GAGGCGGCCA TCACCGAGCT GATCGGCCGT 
GACCTGACCG TGCAGTCGGT GAGCGCCCCC GCTTCCGGCG GGCTGTCCGG CGCGACCTCC 
AACCGCTACC AACTCTCAGT GCTGCTGCCG GCCGACGTGG CCGACAAGCT GGTGCGGGTG 
CTGCCCACCG GTGAGCCCAT CGTCGTGCTG GTCAGCGGCT CGTGA
 
Protein sequence
MAMPPAPSPR RLSRPRWFNV RVVGGILLVI AAIVLGARVM AAGSQTTPVW AASRSLSAGT 
VIGAGDLTAV EVNLGDQAGA YLTPAGDSPV GRTLVAPLGA GELLAGSAVE PTDSGRVVSI 
AVAPEHMPPG VEHGATIDLY LTREANPGSA EAAITELIGR DLTVQSVSAP ASGGLSGATS 
NRYQLSVLLP ADVADKLVRV LPTGEPIVVL VSGS