Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1371 |
Symbol | |
ID | 8446967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1515711 |
End bp | 1516820 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 645040503 |
Product | Peptidoglycan-binding LysM |
Protein accession | YP_003200762 |
Protein GI | 258651606 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0982128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.681396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACG ATGTCAAACG CAAGGATTCG ACGGCAAAGC AATGGTCGGC ACGCCTGACC ATGCTGCTGT GGGTCGGCGG GCTGGCGGTC CTGGTGACGC AACTGCCCCC GCCGGGCCAG CTCTGGGCCG CGGTTTCCGG ATCGGCCCCG GTGACCGCGC CTGCGCCACT GGCCGCCGTG GCGTCGGTCC TGGTGACGAC GGCCGGACTG ATCGCCTGGC TCCTGGTCGG CTGGGCGGCG GTGGTCCTTG CCGTGGGCCT GATCGCCCGG CTCCCCGGAC GCTCGGGCCG CCGGGCCCGG CGACTGCTGC CGCGGATCGC ACCGTCCGCG GTCGGACGGC TGGTGGCGGC CGCGGTGGGC GTGTCCCTGC TCGCCGGTAC CGCGGCATGT GCCGCGCCGG CCGGGGCGAG CGCATCGGCC CGCCCGGCGC CCGCGGTGAC CGCCGGCGCC CCCGTCAACC CCGCCGTCAG CCCCGACGTG ACGCCGGCGC CCGGCTTCAC CACCGCCGCG CCGACCAGCT CGATCGCCAT CGACTGGCCA ACCCCGGACC CCGCCATCCC GGGCTCGACC ACCCCGAGCC CGGCCGCGCC AAGCCAGACA GAACCAAGCC AGACCGCACC GACCTCGACC CCCGGCCCGG TGGCCCCGGA GCCCACCAGC GCGGCCCCGG CGAGCCCCTC GCCCACCCCG CCCGCGACGA CATCGCCGTC CCCGGTTCCC TTCTCGCCGA CCTCGGAGTC CACCGTGCCC GGTTCACCGC CCCCCACCGC CACCGCCGGC ATCCCGGCCC AGACCCCGGC TCCCGCGGCA CCGCCACCCG CGTCGGCGGC ACCCCCACCC GCCCCGGCCG ATACCGGAGC GCCGGCGAGC ACCGACACGG ACACCGACAC CGACACCGGC GGCGCGGTCA CGGTGACGGT GCAGCCGGGA GATTCGCTGT GGCGGATCGC GGCCCGCACC TTGGGCCCCG GCGCGAGCGA CGCCGATATC GACAATTCCT GGCGAGCTTG GTATTTCACC AACCAGCAGG TGGTCGGCGA CGACCCCGAC CAGATAGTGC CGGGCCAGCA GCTGACGGCC CCGACGGTGG CCGGTCAGGT GCGGTCATGA
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Protein sequence | MANDVKRKDS TAKQWSARLT MLLWVGGLAV LVTQLPPPGQ LWAAVSGSAP VTAPAPLAAV ASVLVTTAGL IAWLLVGWAA VVLAVGLIAR LPGRSGRRAR RLLPRIAPSA VGRLVAAAVG VSLLAGTAAC AAPAGASASA RPAPAVTAGA PVNPAVSPDV TPAPGFTTAA PTSSIAIDWP TPDPAIPGST TPSPAAPSQT EPSQTAPTST PGPVAPEPTS AAPASPSPTP PATTSPSPVP FSPTSESTVP GSPPPTATAG IPAQTPAPAA PPPASAAPPP APADTGAPAS TDTDTDTDTG GAVTVTVQPG DSLWRIAART LGPGASDADI DNSWRAWYFT NQQVVGDDPD QIVPGQQLTA PTVAGQVRS
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