| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1309 |
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| Symbol | |
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| ID | 8446905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 1437412 |
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| End bp | 1439163 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645040442 |
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| Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
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| Protein accession | YP_003200701 |
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| Protein GI | 258651545 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0985993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.361254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTCC ATAGGTACGA CGTGGTGATC GTCGGCGCCG GCGGCGCCGG CATGCGCGCC
GCGATCGAGT CGGGCCAGCG GGCCCGCACC GCCGTTCTCA CCAAGCTCTA CCCCACCCGG
TCGCACACCG GCGCGGCGCA GGGCGGCATG TGCGCCGCCC TGGCCAACGT CGAGGACGAC
AACTGGGAGT GGCACACCTT CGACACCGTC AAGGGTGGCG ACTACCTGGT CGACCAGGAC
GCCGCCGAGG TGATGTGCAA GGAGGCCATC GACGCCGTCC TGGACCTGGA GAAGATGGGG
CTGCCGTTCA ACCGCACCCC CGAGGGCCGC ATCGATCAGC GCCGGTTCGG CGGGCACACC
CGCAACCACG GCGAGGCCGC CGTCCGCCGG GCCTGTTACG CCGCCGACCG CACCGGCCAC
ATGATCCTGC AGACGCTCTA CCAGAACTGC GTCAAGCTCG GCATCGAGTT CTACAACGAG
TTCTACGTGC TGGATCTGCT GCTGTCCAAG ACCGACGAGG GCGAGACCTG CACCGGCGCC
GTGGCCTACG AGCTGGCCAC CGGCGAGATC CACGTCTTCC AGGCCAAGTC CGTGGTGATG
GCCACCGGCG GCGCCGGCAA GATCTTCAAG ACCACCTCCA ACGCGCACAC CCTGACCGGT
GACGGTCTGG GCATCGTGTT CCGCAAGGGT CTGCCGCTGG AGGACATGGA GTTCTTCCAG
TTCCACCCGA CCGGCCTGGC CGGCCTGGGC ATCCTGATCT CCGAGGCGGT CCGCGGCGAG
GGCGGGATCC TGCGCAACGC GCAGGGCGAG CGGTTCATGG AGCGCTACGC GCCGACCATC
AAGGACCTCG CGCCGCGCGA CATCGTCGCC CGCTCGATGG TGATGGAGGT CCGCGAGGGC
CGCGGCGCCG GCCCGAACAA GGACTACGTG CTGCTCGACG TCACCCACCT GGGCAAGGAG
GTGCTGGAGA CGAAACTGCC TGACATTGCC GAGTTCTCGC GCACCTACCT GGGGGTGGAG
CCGCTCGACG AGCCGGTCCC GGTCTTCCCC ACCTGCCACT ACGTGATGGG CGGCATCCCG
ACCAACATCG CCGGCCAGGT GCTGCGCAAC AACACCGACG TGGTGCCCGG CCTGTACGCC
GCCGGCGAGT GCGCGTGCGT GTCGGTGCAC GGCTCGAACC GGCTGGGCAC CAACTCGCTG
CTGGACATCA ACGTGTTCGG CCGGCGGGCC GGGATCGCGG CCGCCGAGCA CGCCCTGGCC
AGCGACTTCG TCCAGGTGCC GGACAACCCC GAGGCGCTGG TCATCGAGAT GGTGACCAAG
CTGCGGGAGT CCACCGGCAA GGAGAAGGTC GCCGAGATCC GGACCACCCT GCAGGCCACC
ATGGACCTGA ACGCGGCGGT CTACCGCACC GAGGCCACCC TCAAGGAGGC CCTCAACGAC
GTGCGGGTGC TCAAGGAGCG CTACTCGCGC GTCTCGATCC AGGACAAGGG CCAGCGGTAC
AACACCGACC TGCTGGAGGC CATCGAGCTG GGCTTCCTGC TCGAGCTGGC CGAGATCCTG
GTCGTCGGGG CCCTGGTGCG CACCGAGTCG CGCGGCGGGC ACGCCCGGGA GGACTACCCG
AACCGGGACG ACGCCAACTG GATGCGGCAC ACCATGGCCT ACAAGCAGGG CAACGAACTC
ACCGCGGACA TCCGCCTGGA CTACAAGCCG GTGGTCCAGA CCCGCTACCA GCCGATGGAG
CGCAAGTACT GA
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| Protein sequence | MQFHRYDVVI VGAGGAGMRA AIESGQRART AVLTKLYPTR SHTGAAQGGM CAALANVEDD
NWEWHTFDTV KGGDYLVDQD AAEVMCKEAI DAVLDLEKMG LPFNRTPEGR IDQRRFGGHT
RNHGEAAVRR ACYAADRTGH MILQTLYQNC VKLGIEFYNE FYVLDLLLSK TDEGETCTGA
VAYELATGEI HVFQAKSVVM ATGGAGKIFK TTSNAHTLTG DGLGIVFRKG LPLEDMEFFQ
FHPTGLAGLG ILISEAVRGE GGILRNAQGE RFMERYAPTI KDLAPRDIVA RSMVMEVREG
RGAGPNKDYV LLDVTHLGKE VLETKLPDIA EFSRTYLGVE PLDEPVPVFP TCHYVMGGIP
TNIAGQVLRN NTDVVPGLYA AGECACVSVH GSNRLGTNSL LDINVFGRRA GIAAAEHALA
SDFVQVPDNP EALVIEMVTK LRESTGKEKV AEIRTTLQAT MDLNAAVYRT EATLKEALND
VRVLKERYSR VSIQDKGQRY NTDLLEAIEL GFLLELAEIL VVGALVRTES RGGHAREDYP
NRDDANWMRH TMAYKQGNEL TADIRLDYKP VVQTRYQPME RKY
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