| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1301 |
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| Symbol | |
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| ID | 8446897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1427250 |
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| End bp | 1428854 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645040434 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003200693 |
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| Protein GI | 258651537 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.259093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.204934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCATCT CCACCAACCC GTCGAACGAA CCCCGATCGG GCGTTCATCC GACCTACCAC
CACCCGTCGC CGGAGCAGAC CGAGTCCCAC CTGACCGAGC TCTTCCAGGA GGAGGAGCAG
GGTTACCACA AGGGCCTCAA GGCCCGTCAG GTGCAGATGA TCGCCATCGG CGGCGCCATC
GGCACCGGTC TGTTCCTGGG GGCCGGTGGC CGGCTCGCCC AGGCCGGACC GGCCCTGGTC
TTCATCTACG CGCTCTGCGG CTTCTTCGCC TTCCTGGTGC TGCGGGCCCT GGGCGAATTG
GTGCTGCACC GGCCGTCTTC GGGCTCCTTC GTCTCCTATG CCCGTGAGTT CTACGGCGAG
AAGGCCGCTT TCGCGGCCGG CTGGATGTAC TGGCTGAACT GGGCGATGAC CGCGATCGTG
GACGTCACCG CGGTCGCCCT CTACATGAAG TTCTTCGGCA AGTACTCGCC GTTCATCAAC
TCGGTGCCGC AATGGGTCTG GGCGTTGGTC GCACTGGGCG TCGTGCTGGC GCTGAACATG
GTGTCGGTCA AGGTCTTCGG TGAGCTGGAG TTCTGGTTCG CGCTGATCAA GGTCGTCGCG
CTGGTCGCCT TCCTGCTGGT CGGCACCTAC TTCGTCATCT TCGGCACACC CATCGACGGT
CAGCCGGTCG GTTTCAGCCT GATCGCCGAC AACGGCGGCT GGCTGCCCAA CGGGCTGCTG
CCGGCGATCG TGATCATCCA GGGTGTCGTG TTCGCCTACG CCTCGATCGA GCTGATCGGC
ACCACCGCCG GCGAGACCGC CAACCCGGAG AAGGTGATGC CCAAGGCGAT CAACACCGTC
ATCCTGCGGA TCGGCGTCTT CTACGTCGGC TCGGTCCTGT TGCTGGTCCT GCTGCTGCCC
TACACCGCCT ACCAGGCCGG GGTGTCGCCG TTCGTCACCT TCTTCGACTC GATCGGCGTC
AACGGCGTCG GCGTGATCAT GAACCTGGTC GTGCTGACCG CCGCGCTGTC CTCGCTCAAC
GCCGGCCTGT ACTCCACCGG CCGCATCCTG CACTCGATGG CCAAGAACGG GTCGGCGCCC
AAGTACGCCG GCCGGATGAA CAAGGCGGGC GTGCCCTACG GCGGCATCAC GATCACCGCG
GCGGTGACCC TGCTGGGTGT CGGGCTCAAC GCGGTCGTCC CCGAAGAGGC TTTCGAGATC
GTGCTCAACG TGGCTTCGCT GGGCATCGTT GCGGCCTGGG CGACAATCGT GCTGTGCCAG
ATCCGGCTCA AGCAGTGGGC GGACAAGGGC CTGCTCAAGC GGCCCTCGTT CCGGATGATC
GGCGCCCCGT TCACCTCGTA CCTCACGCTG GGCTTCCTGG CCGCCGTGCT GGTGCTCATC
GGATTCGACT ACCCGGTCGG CACCTACACC ATCGGCTCGC TGGTGATCAT CGTGCCGCTG
CTGGTGCTCG GCTGGTTCTT GTGCCGTGGC CGGATCGCCG CCATCGCCCA GGAGCGGGCC
TCGATCACCG GGCAGTACCC GGTGGTGGCC AACCCGACCC CGATCACGCC CGCGACCGAC
CCCGCCGACC CGGAGTCGCC GACCGACACC CCGCCGGCCC GGTAG
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| Protein sequence | MTISTNPSNE PRSGVHPTYH HPSPEQTESH LTELFQEEEQ GYHKGLKARQ VQMIAIGGAI
GTGLFLGAGG RLAQAGPALV FIYALCGFFA FLVLRALGEL VLHRPSSGSF VSYAREFYGE
KAAFAAGWMY WLNWAMTAIV DVTAVALYMK FFGKYSPFIN SVPQWVWALV ALGVVLALNM
VSVKVFGELE FWFALIKVVA LVAFLLVGTY FVIFGTPIDG QPVGFSLIAD NGGWLPNGLL
PAIVIIQGVV FAYASIELIG TTAGETANPE KVMPKAINTV ILRIGVFYVG SVLLLVLLLP
YTAYQAGVSP FVTFFDSIGV NGVGVIMNLV VLTAALSSLN AGLYSTGRIL HSMAKNGSAP
KYAGRMNKAG VPYGGITITA AVTLLGVGLN AVVPEEAFEI VLNVASLGIV AAWATIVLCQ
IRLKQWADKG LLKRPSFRMI GAPFTSYLTL GFLAAVLVLI GFDYPVGTYT IGSLVIIVPL
LVLGWFLCRG RIAAIAQERA SITGQYPVVA NPTPITPATD PADPESPTDT PPAR
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