Gene Namu_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1294 
Symbol 
ID8446890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1419294 
End bp1420310 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content69% 
IMG OID645040427 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_003200686 
Protein GI258651530 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.52128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGT CCGACGCCAC CGACCGCAAG CCGCGGGTGC TGTCCGGCAT CCAGCCGACG 
GCCGATTCGT TCCATATCGG CAACTACCTC GGCGCGCTGC GGCAATGGGT GCGGATGCAG
GACACCCACG AGTGTTTCTA CTCGGTGGTC GACCTGCACG CGATCACGGT CGAACAGGAT
CCGGCGGTGC TGCGGCACCG GACCCGGGTC GCGGCCGCCC AGCTGCTCGC CCTGGGCCTC
GACCCGGAGC GGTGCACGCT GTTCGTGCAG TCCCAGGTGC CGGCGCACAC CCAGCTGTCG
TGGGTGATGG AGTGCCTGAC CGGGTTCGGC GAGGCCAGCC GGATGACGCA GTTCAAGGAC
AAGTCGCAGC GCGGCGGCGC GGACCGTTCC AGCGTCGGCC TGTTCACCTA CCCGATCCTG
CAGGCCGCCG ACATCCTGGC CTACCAGGCC GACGCGGTGC CGGTCGGCGA GGACCAGCGC
CAGCATCTGG AGCTGACCCG GAACCTGGCC CAGCGGTTCA ACGCCCGCTA CGGCCCCACC
TTCGTGGTGC CCGAGCCCTA CATCCTCAAG TCGACCGCCA AGATCTACGA CCTGACCGAG
CCGCGGGCCA AGATGAGCAA GTCGCTACCC GGCGGCACCC TGGACCTGCT GGCCCCGGTG
AAGGCGTCGG TCAAGCGGAT CAAATCGGCG GTCACCGACA CCGAACGGGA GATCCGGTAC
GACGAGGAGA ACAAGCCCGG GGTGTCCAAC CTGCTCGGCC TGCTCTCCGA ACTGCGCGAG
GTGCCGATCC CGGCCCTGGA GCAGGAGTAC GCCGGACGCG GCTACGGCGA CCTCAAGTCG
GACCTGGCGG CCGCGTTCGT CGCCTTTGCC GAGCCGGTGC AGGCCCGGGT GCAGGAGTAC
CTGACCGACC CGGCGGCGCT GGACAAGGTG CTGGACCTGG GCGCCCAGCG GGCCCGGCAG
GTCGCTGACG TTACCGCCGC CACCGTGTAC GAAAAGGTCG GGCTGGCCGT CGGCTGA
 
Protein sequence
MSESDATDRK PRVLSGIQPT ADSFHIGNYL GALRQWVRMQ DTHECFYSVV DLHAITVEQD 
PAVLRHRTRV AAAQLLALGL DPERCTLFVQ SQVPAHTQLS WVMECLTGFG EASRMTQFKD
KSQRGGADRS SVGLFTYPIL QAADILAYQA DAVPVGEDQR QHLELTRNLA QRFNARYGPT
FVVPEPYILK STAKIYDLTE PRAKMSKSLP GGTLDLLAPV KASVKRIKSA VTDTEREIRY
DEENKPGVSN LLGLLSELRE VPIPALEQEY AGRGYGDLKS DLAAAFVAFA EPVQARVQEY
LTDPAALDKV LDLGAQRARQ VADVTAATVY EKVGLAVG