| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1265 |
|---|
| Symbol | sucC |
|---|
| ID | 8446861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1388078 |
|---|
| End bp | 1389280 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645040399 |
|---|
| Product | succinyl-CoA synthetase subunit beta |
|---|
| Protein accession | YP_003200658 |
|---|
| Protein GI | 258651502 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0200943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.595801 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATCTGT ACGAGTACCA GGCGAAGGAA CTCTTCGTCG CGCATGGTGT GCCCGCTCCG
GCCGGCCGGG TGGCGCGCAC CGTGGAGGAA GCGGTAGCCG CGGCCCAGGA GCTGGGCGTG
CCGGTGATGG TGAAGTCGCA GGTGAAGATC GGCGGCCGGG GCAAGGCCGG CGGCGTGAAG
TTCGCCGCCA CCCTGGACGA CGTGCGCACC CATGCGGGCA ACATCCTGGG CCTGGACATC
AAGGGCCACG TGACCCGGCA GGTGCTGATC ACCCCGGCGA GCGAGATCGC GCAGGAGTAC
TACGTCTCCT ACCTGCTGGA CCGGTCGAAC CGGACCTTCC TGGCCATGGC CACCAAGGAC
GGCGGCATGG AGATCGAGCA GCTGGCCGAG GAGCGGCCGG ACGCCCTGGC CCGGATCCCG
GTCAACGCGC TGACCGGCGT CGACGCCGAG AAGGCCAAGG AGATCGCCGC TGCCGGCAAG
TTCCCGGCCG ACGTCGTCGA CCAGGTCGAG GCCGTGCTGG TCGGGCTGTG GGACACCTTC
GTCGGCGAGG ACGCCACCCT GGTCGAGGTG AACCCGCTGG TCAAGGACGG CGAGGGCAAG
GTCGTCGCGC TCGACGGCAA GGTCTCGCTG GACGCCAACG CGGACTTCCG GCACCCGGAG
CATGCGGCAC TGGCCGACAC CGCGGCGGAG AACCCGCTGG AGGTCGCGGC CAAGGAAAAG
GGTCTGAACT ACGTCAAGCT GGACGGTGAC GTCGGCATCA TCGGCAACGG CGCCGGCCTG
GTCATGTCCA CGCTCGATGT CGTCGCCTAC GCCGGTGAGG CCCACGGCGG GGTCAAGCCG
GCCAACTTCC TGGACATCGG CGGCGGCGCC AGCGCCGAGG TGATGGCCAA CGGGCTGGAG
ATCATCCTGT CCGACCCGGA CGTCAAGGCG GTGTTCGTCA ACGTCTTCGG CGGCATCACC
GCGTGCGACG CGGTGGCCAA CGGCATCGTC GGCGCCCTGA AGATGCTCGG TGACGAGGCC
ACCAAGCCGC TGGTCGTCCG GTTGGACGGC AACAACGTGC TGGAGGGTCG GGCGATCCTC
AACGAGGCGA ACCACCCGCT GGTCATCCAG GCCGAGACGA TGGACGAGGG CGCGGACAAG
GCCGCCGAGC TGGCCCACCA ATCCGGCGCG GCCGCCCTGA ACAGCACGAG CACGGGAGTC
TGA
|
|---|
| Protein sequence | MDLYEYQAKE LFVAHGVPAP AGRVARTVEE AVAAAQELGV PVMVKSQVKI GGRGKAGGVK
FAATLDDVRT HAGNILGLDI KGHVTRQVLI TPASEIAQEY YVSYLLDRSN RTFLAMATKD
GGMEIEQLAE ERPDALARIP VNALTGVDAE KAKEIAAAGK FPADVVDQVE AVLVGLWDTF
VGEDATLVEV NPLVKDGEGK VVALDGKVSL DANADFRHPE HAALADTAAE NPLEVAAKEK
GLNYVKLDGD VGIIGNGAGL VMSTLDVVAY AGEAHGGVKP ANFLDIGGGA SAEVMANGLE
IILSDPDVKA VFVNVFGGIT ACDAVANGIV GALKMLGDEA TKPLVVRLDG NNVLEGRAIL
NEANHPLVIQ AETMDEGADK AAELAHQSGA AALNSTSTGV
|
|---|
| |