Gene Namu_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1236 
Symbol 
ID8446832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1357855 
End bp1358730 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content68% 
IMG OID645040371 
ProductIntegrase catalytic region 
Protein accessionYP_003200630 
Protein GI258651474 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.305005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGACCG AGCACCTGGG TCTGCGGATC GCCCCGTCCA CCTACTACGA GCACGCCGCC 
CGGCCCGCCC AGACGCGGCC GGCCGCGGTG CGGGATGCGG CCCTGCTCGA GCAGATCCGC
CGGGTCCACA CAGAGAACAA CCACGGCACC TATGGTGCCC GGAAGGTGTG GCTGCAGCTG
AACCGGGAAG GCGTCTCGGT GGCCCGGTGC ACCGTGGAAC GGCTGATGCG CTCCGCCGGC
CTGGTCGGTG TCCGCCGGGG CAAGATCAAG CGGACGACGG TCGCCGATCC GGGTGCGCAG
CGGCCCGCTG ACCTGGTGCA ACGACGGTTC GGCGCGCTCG TGCCGGATCG TTTGTGGGTG
GCCGACATCA CCTACGTGAG TACCTGGTCG GGATGGGTGT ACGTGGCGTT GGTGACCGAT
GCCTACGCCC GCCGCATCCT GGGCTGGCGG GTCGCGACCA CGATGACCAC ACAGCTCGTC
CTGGACGCGT TGGAGCAGGC CATCTGGACC CGTCAACGGG CCGACCGGAC TGTGGAACAC
GTCGTGGCGC ACAGCGACCG CGGGTCCCAG TACACATCCA TCCGGTACTC CGAACGCCTC
GCCGAGGTCG GCATCGCAGC ATCGGTCGGC AGCGTCGGCG ACTCCTACGA CAACGACCTG
GCCGAAACAA TCAACGGCCT GTACAAGGCC GAAGTGATCC GTCACCGCGG CCCCTGGCGC
AGCATCGACT CCGTCGAATT CGCCACCGCC GAATGGATCG ACTGGTACAA CCACCGACGC
CTGCACGAGT ACTGCGGCGA CATCCCACCA GCCGAACTCG AGGACGCGTT CTACGCTCAC
CACCGAGCCC AGCAAACCGC CGGACTCACC GTTTGA
 
Protein sequence
MLTEHLGLRI APSTYYEHAA RPAQTRPAAV RDAALLEQIR RVHTENNHGT YGARKVWLQL 
NREGVSVARC TVERLMRSAG LVGVRRGKIK RTTVADPGAQ RPADLVQRRF GALVPDRLWV
ADITYVSTWS GWVYVALVTD AYARRILGWR VATTMTTQLV LDALEQAIWT RQRADRTVEH
VVAHSDRGSQ YTSIRYSERL AEVGIAASVG SVGDSYDNDL AETINGLYKA EVIRHRGPWR
SIDSVEFATA EWIDWYNHRR LHEYCGDIPP AELEDAFYAH HRAQQTAGLT V