Gene Namu_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1235 
Symbol 
ID8446831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1356930 
End bp1357865 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content68% 
IMG OID645040370 
Producthypothetical protein 
Protein accessionYP_003200629 
Protein GI258651473 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.192457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGTCC TCGTCCCGGG ACCGACACGC CCCGACCTGC CTGGTCAGGG GGTCAAGGTC 
GATCAGTGGT CGTACACCAC TCTGGTGGAC TTAACTGAAG GTTTGCGCTG GGTGTGCCGT
TGCGACATCG ACAACTGCTT TCCCTCGATT CCGAAGGATC GCTTGCGGCG CAAGCTCACC
GCGCTGTTCC AGGGCGACCC GACCCTGCTG GGGATCCTGA CCCGCCTGCT CGCCCGGCCG
GCTGGCGGCT CCCCGGCCGA GGCACTGCCA GGGTTGCCGC AAGGGTCGCC GCTGTCACCC
CTGTGGGCGA ATCTGATTCT GGCGGACTTC GATGACGCGG TCGCCCGGAC CGGGTTTCCC
CTGGTGCGGT ACAGCGACGA CATGGTGATT GCGGCCGCGG ACCGCGCCGA GGCATGGGAG
GCGATGCGGG TGGCCCATGA TGCCGCCGCC GGTATCGAGA TGTCGTTGGG GGCCGACAAG
AGCGCGGTGA TGTCCTTCGA CGAGGGTTTC ACCTTTCTGG GCGAGGACTT CGGTCCGCGT
TACCCACCGG CGTTGAGTGA TCATCGGACG GTCGACCCGC CCCGGCGCGT GCTGTACCTG
GGGGTGCAGG GATCCAGGGC CCGCATCATG GACGGCCGGG TGATCGTCGA ATCAGGGGAC
GACGCTGAAC TGCTCGACGT CCCCTCGGGG TTGATCGAGC GGATCGTCAC CTTCGGCGGG
GTTGGCGTGT CCGCCGGTTT GCGCTCGTGG GCGCTGGCCA ACCAGGTCGA CCTGGTGTTC
TTGTCCCGAC GCGGCAGCTA TCTGGGACAC GCCTGGGCGG CGGCGGCCGA CCACCGGGTG
TCCCGGCTTC GGGCCCAACT CGCGGCCGCC GACGATCAGG CAGTGTGGCT CCCCTTGAAT
CCCCCCGGCG TGTCCGGAGG CTGTCTCAAA CGGTGA
 
Protein sequence
MAVLVPGPTR PDLPGQGVKV DQWSYTTLVD LTEGLRWVCR CDIDNCFPSI PKDRLRRKLT 
ALFQGDPTLL GILTRLLARP AGGSPAEALP GLPQGSPLSP LWANLILADF DDAVARTGFP
LVRYSDDMVI AAADRAEAWE AMRVAHDAAA GIEMSLGADK SAVMSFDEGF TFLGEDFGPR
YPPALSDHRT VDPPRRVLYL GVQGSRARIM DGRVIVESGD DAELLDVPSG LIERIVTFGG
VGVSAGLRSW ALANQVDLVF LSRRGSYLGH AWAAAADHRV SRLRAQLAAA DDQAVWLPLN
PPGVSGGCLK R