| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1193 |
|---|
| Symbol | |
|---|
| ID | 8446789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1311768 |
|---|
| End bp | 1312490 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645040330 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003200589 |
|---|
| Protein GI | 258651433 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGT CACGGGTGCT CGTCGTCGAC GACGACGACA CCGTCCGCGA GGTCCTGCGC
CGCTACCTGA CCCGGGACGG TCACGACGTG CTGGAGGCGG CGGACGGGCC GACCGGCCTG
CGGCTGGTGC GCAGCCACCA CCCCGACCTG ATCGTGCTCG ACCTGATGCT GCCGGGCATG
GACGGATTGC AGGTCTGCCG CGAGGTCCGC CGCACCTCCA CCGTGCCGGT GATCATGCTC
ACCGCTCTGG GCCAGGAATC GGACCGGGTG GTCGGCCTGG AGTTCGGCGC CGACGACTAC
GTGGTCAAGC CGTTCAGCCC GCGCGAGCTG GCCCTGCGGG TGTCCCGGGT GCTGCAACGC
AGCCGCGGCC CGGCCGCCCC GGCCGCGCCG GGCAGCGCCG AGGTGACCAG TGCCGACGGG
GAACTGTCGG CGAACGCGTT GTCCCGCACC GCCCGTCGCG GCGGCGACGA GCTGGCCCTG
ACCAGCCGGG AGTTCGACCT GCTGCACTTC CTGTTGGCCC ACCCCGGACA GGTGTTCAGC
CGGACCGAGC TGATGGAGCA GGTCTGGGGC TGGTCGTTCG GCGACCAGTC GACGGTGACG
GTGCACGTGC GCCGGCTGCG GGAGAAGGTC GAACCCGACC CGACCAAGCC GACCCGGATC
GTGACCGTCT GGGGCGTGGG CTACCGGCTC GACGGCGACC TGCGCCCGGC CGACCCGGGC
TGA
|
|---|
| Protein sequence | MDPSRVLVVD DDDTVREVLR RYLTRDGHDV LEAADGPTGL RLVRSHHPDL IVLDLMLPGM
DGLQVCREVR RTSTVPVIML TALGQESDRV VGLEFGADDY VVKPFSPREL ALRVSRVLQR
SRGPAAPAAP GSAEVTSADG ELSANALSRT ARRGGDELAL TSREFDLLHF LLAHPGQVFS
RTELMEQVWG WSFGDQSTVT VHVRRLREKV EPDPTKPTRI VTVWGVGYRL DGDLRPADPG
|
|---|
| |