Gene Namu_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1190 
Symbol 
ID8446786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1308835 
End bp1310019 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content76% 
IMG OID645040327 
Productalanine racemase 
Protein accessionYP_003200586 
Protein GI258651430 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.964893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCA CCGCTGGGTC GACCGCCGGG CCGACCGCCG ACCCGACGCC TCGGCGGGCC 
GGCGAGCGGG TGGCGGCCGT GGTCGACCTG GCCGCGATCA CCGCGAACGT GCGCACCCTG
CTGGCCCTGA TGCGCGGGTC GAACCCGGCC GGGTCGGTGA TGGCGGTGGT CAAGGCCGAC
GGCTACGGGC ACGGCGCGGT CGCGGCCGCG CAGGCGGCGC TGGCCGGCGG TGCGACCTGG
CTGGGCGTAG CTACCCCGAC CGAGGCCCTG CAGCTGCGGG CGGCCGGGGT CGACGTGCCG
GTCCTGGCCT GGCTGTGGCC GCCCGGGGAA CGGGTCGCGC CGGCGCTGGC GGCCGGGGTG
CAGCTGGCCG TGGCCAGCCG CGCGCAGCTG GACCGGGTCC TGGACCAGGC CGTCGGTGCG
GTGCCCGACA TCCACGTCAA GGTCGACACC GGCCTGGGTC GGGGTGGGGT CGGACCGGCG
GAGATCGGCG CCGTGCTGGA CGCGGTGGCC GCCGCCCAGC GGGCCGGTCG GGTCCGGGTC
GCCGGCCTGA TGAGCCACCT GGCCAGCGCC GACGTGCCCG ACGACCCGTC GGTGCCCGAG
CAGACGGCCA CCTTCCACCG GATCCTGGCC GCCGCGGCCG ACCGCGGCAT CGACCCGCCG
CTGCGGCACC TGGCCAACAC CGCCGGCCTG ATCGACCATC CGGCCACCCG GTTCGACCTG
GTCCGGGTCG GCATCGGCGG CTACGGCCTG AACCCGGTCG CCACCCCGGT GCCGCTGACC
CCGGCGATGA CCCTGCGCGC GACCGTCGCC CTGACCAAGC GGGTGCCGGC CGGCCACGGG
GTGTCCTACG GCCTGACCTA CCGGACCGAT CGGGAGACCA CGCTCGCGCT GATCCCCCTG
GGGTACGCCG ACGGCCTGCC GCGGGCAGCC AGCAATCGCG GCGAAATCTG GTTGGCCGGC
GCCCGGCGGC GGATCGCCGG CCGGGTGGCG ATGGATCAGG TCGTCGTGGA CTGTGGCGAC
GACCCGGTGG CCGCCGGCGA TCCGGCGATC GTCTTCGGGC CGGGGGAGCA GGGCGAACCG
ACCGCGCGCG ACTGGGCCGA CTACTGCGGG ACCATCGACT ACGAGATCGT GACCAGGATC
GGGCCGAGGG TGCCCCGACG CAATGTCGGG GAGGCAATTC CATGA
 
Protein sequence
MSTTAGSTAG PTADPTPRRA GERVAAVVDL AAITANVRTL LALMRGSNPA GSVMAVVKAD 
GYGHGAVAAA QAALAGGATW LGVATPTEAL QLRAAGVDVP VLAWLWPPGE RVAPALAAGV
QLAVASRAQL DRVLDQAVGA VPDIHVKVDT GLGRGGVGPA EIGAVLDAVA AAQRAGRVRV
AGLMSHLASA DVPDDPSVPE QTATFHRILA AAADRGIDPP LRHLANTAGL IDHPATRFDL
VRVGIGGYGL NPVATPVPLT PAMTLRATVA LTKRVPAGHG VSYGLTYRTD RETTLALIPL
GYADGLPRAA SNRGEIWLAG ARRRIAGRVA MDQVVVDCGD DPVAAGDPAI VFGPGEQGEP
TARDWADYCG TIDYEIVTRI GPRVPRRNVG EAIP