Gene Namu_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1189 
Symbol 
ID8446785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1307284 
End bp1308726 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content77% 
IMG OID645040326 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_003200585 
Protein GI258651429 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAGG CCTACACCGT CGAGCAGATC CGGGCCGTGG AGGCGCTCGC GCTGGCGCGC 
GACGGCGACG CGACCCTGAT GCGCCGGGCC TCGTTCGCGG TGGCCGCCGA GGTGGCCGAG
CGGGTACCCG CGCCGCATCC CGGGCGGCGG GTGGTGCTGC TGGTCGGGTC GGGCAACAAC
GGCGGCGACG CCCTGTACGC GGGCGCCTTC CTGCGGGGCC GGGGGATGGC GGTCACCGCG
CTGCTGCTCA GCCCGGAGCG CACCCATGCC GGCGGTCGGG CCGCGCTGCG CCGGGCCGGC
GGCCGGATCC TGACCCACGA CGATCCGGCG GGGCCGGGGA TCATCGCCCG GGCCGAGGTG
ATCATCGACG GGGTGGTCGG CATCGGCGCC ACCCCGCCGC TGCGGGCCGC GGCCGCCGAG
CTGATCGGGC AGGCCAACGC GACCGATGCG CTGCGGGTCG CGGTCGACCT GCCCAGCGGG
ATCGAGCCGG ACACCGGCCA GGTCCGGGGG ACCTGCTTCC TGGCCGACGT CACCGTCACT
TTCGGCGGCA TCAAGGTGGG CCTGCTGATC GCCGATCAGC AGGCCGGCAC CGTGGTCAAC
GTGCCCATCG GCATGGACAT GACCGGCCGC CCGGCCGAGG TGATCGCGAT GACCGACGGC
AGCCTGCGGC AGGTGCTGCC GGCCCCCGCG CCGGCCGCCG ACAAGTACTC CGGCGGGCTG
GTCGGCGTGG TCGCCGGCTC GCCCGGATAC CCGGGCGCCG CGGTGCTCTG CGTGGGCGGG
GCCGTCCGCA CCCGGCCGGG CATGGTCCGT TACGCCGGGC CGCAGGCCGC GGCGGTGGTG
GCCCGCTGGC CGGAGGCGGT CGCGGTCGAC TCGCCCGCCG ACGCCGGCAC CGTGCAGGCC
TGGGTCGTCG GCCCCGGGAT GGGCACCGAG GGCCAGTCGA TCACCCTGCT GCGCTGGGTG
CTGGGCCGGG ACGAGCCGGT GCTGGTCGAC GCCGACGGGC TGACCATCCT GGCCGCCATG
CCGGCGTTGC TGCAGGCCCG CCGGCGGGCC GGCCAGCCGA CCGTGCTCAC CCCGCACGAC
CGCGAGTTCA GCCGGGTGTT CCCGGACATC GAGCTGGACG ACCGGCTGGC CGCCGTGCGC
CGGGCCGCCT GGGTCAGCGG GGCGACCGTC CTGCTCAAGG GGCATCGCAC GCTGATCGCC
GACCCCGGCG GGCAGGCCGC GGTCAACCTG TCCGGCTCGT CCTGGCTGGC CACGGCCGGC
TCCGGGGATG TGCTCAGCGG CGTCGTCGGC TCGTTGCTGG CCGCCGGTCT GCCGCCCCTG
CTGGCCGCCA GCGCCGGCGC GTTCCTGCAC GGCCGGGCCG GCCAGCGGGC CCAGCGGGCC
GGGTTGTTCG GTGCGCACGC GCTGTGGGAT CACCTGCGGG CCGACCCGGA CGGCATCGGC
TGA
 
Protein sequence
MIEAYTVEQI RAVEALALAR DGDATLMRRA SFAVAAEVAE RVPAPHPGRR VVLLVGSGNN 
GGDALYAGAF LRGRGMAVTA LLLSPERTHA GGRAALRRAG GRILTHDDPA GPGIIARAEV
IIDGVVGIGA TPPLRAAAAE LIGQANATDA LRVAVDLPSG IEPDTGQVRG TCFLADVTVT
FGGIKVGLLI ADQQAGTVVN VPIGMDMTGR PAEVIAMTDG SLRQVLPAPA PAADKYSGGL
VGVVAGSPGY PGAAVLCVGG AVRTRPGMVR YAGPQAAAVV ARWPEAVAVD SPADAGTVQA
WVVGPGMGTE GQSITLLRWV LGRDEPVLVD ADGLTILAAM PALLQARRRA GQPTVLTPHD
REFSRVFPDI ELDDRLAAVR RAAWVSGATV LLKGHRTLIA DPGGQAAVNL SGSSWLATAG
SGDVLSGVVG SLLAAGLPPL LAASAGAFLH GRAGQRAQRA GLFGAHALWD HLRADPDGIG