| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1188 |
|---|
| Symbol | |
|---|
| ID | 8446784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1306880 |
|---|
| End bp | 1307287 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 645040325 |
|---|
| Product | holo-acyl-carrier-protein synthase |
|---|
| Protein accession | YP_003200584 |
|---|
| Protein GI | 258651428 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) |
|---|
| TIGRFAM ID | [TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.884581 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGTCG GCGCGAGCGT GGTCGCCGTC GGCATCGACG TCGTCGCGGT CGACCGGTTC
GCCGCCGCGC TGGCCCGCAC GCCGACGCTG GCCCGTCGGC TGTTCAACCC GGACGAGCAG
GTGACGGCCA CCGGCCATCC GCGGGGCCCG GCGTCGCTGG CCGCCCGGTT CGCGGTCAAG
GAGGCGGTGG CCAAGGCCCT GGGCGTGCCC GCCGGCATGG ACTGGCACGA CTGCCGGGTC
GTCTCCGAGC TCTCCGGCCG CCCGGTGCTG CAGGTCAGCC AGACCGTGGC CGACGCGGCC
GCCGCCCAGG GCATCACCGA CTGGCGGATC TCGGTGTCCC ACGACGCGGG CATCGCGGCC
GCCGTGGTGC TGGCGATCGG CCCGGCCCGG ACGGAGTCGA CCCCGTGA
|
|---|
| Protein sequence | MPVGASVVAV GIDVVAVDRF AAALARTPTL ARRLFNPDEQ VTATGHPRGP ASLAARFAVK
EAVAKALGVP AGMDWHDCRV VSELSGRPVL QVSQTVADAA AAQGITDWRI SVSHDAGIAA
AVVLAIGPAR TESTP
|
|---|
| |