| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1185 |
|---|
| Symbol | |
|---|
| ID | 8446781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1302696 |
|---|
| End bp | 1303934 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645040322 |
|---|
| Product | transposase IS111A/IS1328/IS1533 |
|---|
| Protein accession | YP_003200581 |
|---|
| Protein GI | 258651425 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.723874 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.294088 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCCCTGC CCGAATGCGA TTTCTACGTC GGTATCGATT GGGCCGCCCA AACGCACGCC
GTGTGTGTGC AGGACGCGGC CGGGAAGATC ACCGCGCAGT TCACGATCGA GCACACCGCC
GACGGTTTCG CGACCCTGTT GGCCCGCCTG GGTCGGTTGG CCAGCGACCC GATGCAGGTC
AGCGTCGCCC TGGAACGGCC CGACGGTCGG CTGGTCGACG CCCTGCTCGA GGCTGGCTAC
CCGGTGGTGC CGGTCAGCCC GAACGCGATC AAGACCTGGC GCGACGGTGA GGTGCTCTCC
GGCGCCAAGT CCGACGCCGG CGACGCCGCC GTCATCGCCG AGTACCTGCG GTTGCGGTCG
CACCGGCTGC GGCCGGCCAC CCCGTTCACC GCGCAGACCA AGGCGGTTCG GACGGTCGTG
CGCACCCGCG ATGACATCGT GGCCATGCGG ACCGCCACGG CGAACCAGCT GACCGCCCTG
CTCGATGCCC ACTGGCCCGG CGCCACCAAG GTTTTCGCCG ATATCGAGTC GCCGATCGCG
TTGGAGTTCC TGACCCGGTA CCCGACCGCC AAACACGCCG CGGGCCTGGG TGAGAAGCGC
ATGGCCGCGT TCTGCGTCAA GCACGGCTAC TCCGGTCGCC GCTCGGCCGC GGAGCTGCTG
ACCCGGCTGC GGGCTGCGCC GGCCGGCACC ACCGACCCGG ACCTGGTCGA GGCCGTCCGG
GACGCCGTGC TGGCGCTGGT GGCCGTGCTG CGCACCCTCG GCGCGGTCCG CAAGGACCTG
GACCGGTCGG TGACCGCCCA TCTCGGGGAG CACCCGGACG CCGCGATCTT CACGTCGCTG
CCAAGGTCGG GTCAGATCAA CGCCGCCCAG GTGCTCGCCG AGTGGGGCGA TTCCCGCCAA
GCCTACGACT CGCCCGACGC CGTCGCGGCA TTGGCAGGCC TGACGCCGGT CACCAAAGCG
TCCGGGAAAT ACCACGCCGT GCATTTCCGC TGGGCCTGCA ACAAAGGGTT CCGCAAAGCG
ATGACCACGT TCGCCGACAA CAGTCGCCAC CAGAGCCCAT GGGCGGCCGA CGTATACCGA
CGAGCCATCC AACGCGGACA CGACCACCCG CACGCCGTCC GGGTGCTGGC TCGCGCCTGG
GTGCACGTCA TCTACCGCTG CTGGCTCGAC CGGCAGCCTT ACGACCCGGC CCGGCACGGG
AACGCGATCA AGATCAACAA CGGCCAAATT GCGGCCTGA
|
|---|
| Protein sequence | MSLPECDFYV GIDWAAQTHA VCVQDAAGKI TAQFTIEHTA DGFATLLARL GRLASDPMQV
SVALERPDGR LVDALLEAGY PVVPVSPNAI KTWRDGEVLS GAKSDAGDAA VIAEYLRLRS
HRLRPATPFT AQTKAVRTVV RTRDDIVAMR TATANQLTAL LDAHWPGATK VFADIESPIA
LEFLTRYPTA KHAAGLGEKR MAAFCVKHGY SGRRSAAELL TRLRAAPAGT TDPDLVEAVR
DAVLALVAVL RTLGAVRKDL DRSVTAHLGE HPDAAIFTSL PRSGQINAAQ VLAEWGDSRQ
AYDSPDAVAA LAGLTPVTKA SGKYHAVHFR WACNKGFRKA MTTFADNSRH QSPWAADVYR
RAIQRGHDHP HAVRVLARAW VHVIYRCWLD RQPYDPARHG NAIKINNGQI AA
|
|---|
| |