| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1174 |
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| Symbol | |
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| ID | 8446770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1289991 |
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| End bp | 1290908 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 645040311 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_003200570 |
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| Protein GI | 258651414 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.329599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCACC GGCCCGACCG GCTGCGGCAC GGGGTCGTTC CCGTTCCCGA GAAGAATCCG
GAGCCGATGC CCGAGCGTCG CCTGCGCCTG GACATCAGCT ACGACGGCAC CGATTTCGCC
GGCTGGGCGA TCCAGCCCGG GCTGCGCACG GTGGCCGGCG AGCTGACCAG CGCCCTGACC
ACCATCGTGC GCACCCCGGT CCGGCTGGTC GTGGCCGGCC GCACCGACGC CGGCGTGCAC
GCGGCCGGCC AGGTGGCCCA CGTCGACCTG CCCCAGGCGG CCCTGCTGAC CGTCATCCCC
CGGGACCGGG CCGATCACCC CGACCCCGAG CGGGCCGGCC GCCTGGGCCT GCTGCGCCGG
CTCGGCGGGC TGCTGCCGCC GGACGTGCGG GTGCGGGCCG TGCTAGCCGC GCCGGAGGGC
TTCGACGCCC GGTTCTCCGC GCTGCGCCGC CGCTACCGCT ACCGGATCGG CACCGCCGAA
TGGGGTGTCG AGCCGGCGGA CCGCCGGTTC GTCTACGCCC GCCGGCGCAC GCTCGACGTC
GAGGCGATGA CCTTGGCCGC CCAGGCGCTG GTCGGCCTGC ACGACTTCCA CGCCTTCTGC
CGCCCTCGGG AGGGGGCGAC CACCATCCGT GACCTGCAGA AGCTGACCGT GACCCGGGCC
GGTGACGAGG TGCGGATCGA CGTCGTCGCC GACGCGTTCT GCCACTCGAT GGTCCGGGCC
CTGGTCGGCT CGCTGCTGGC CGTGGGCGAG CTGCGAATGC CCACCGCCCG GCCGGCCGAG
TTGCTGGCCG CCGGCGAGCG GACCTCGGCG TTCGCCGTGG CGCCGGCGCA CGGCCTGAGC
CTGGTCGGGG TGGACTATCC GCCCCCCGCC GAACTGGCCC GCCGGGCCCA CGACACCCGG
GCCGTGCGCT CGCTCTGA
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| Protein sequence | MTHRPDRLRH GVVPVPEKNP EPMPERRLRL DISYDGTDFA GWAIQPGLRT VAGELTSALT
TIVRTPVRLV VAGRTDAGVH AAGQVAHVDL PQAALLTVIP RDRADHPDPE RAGRLGLLRR
LGGLLPPDVR VRAVLAAPEG FDARFSALRR RYRYRIGTAE WGVEPADRRF VYARRRTLDV
EAMTLAAQAL VGLHDFHAFC RPREGATTIR DLQKLTVTRA GDEVRIDVVA DAFCHSMVRA
LVGSLLAVGE LRMPTARPAE LLAAGERTSA FAVAPAHGLS LVGVDYPPPA ELARRAHDTR
AVRSL
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