Gene Namu_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1172 
Symbol 
ID8446768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1288049 
End bp1289131 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content69% 
IMG OID645040309 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_003200568 
Protein GI258651412 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.559989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCT CCCAGCGCCC CAGCTTGACC GAGGAGCCGG TGGCCGACAA CCGGTCCCGC 
TTCATCATCG AGCCGCTCGA GCCCGGATTC GGGTACACCC TGGGCAACTC CCTGCGGCGC
ACCCTGCTGT CCTCCATCCC CGGCGCGAGC GTCACCAGCA TCCGCGTCGA CGGCGTGCTG
CACGAGTTCA CCACCGTGCC CGGCGTCAAG GAGGACATCA CCGAGCTGAT CCTGAACCTC
AAGGAACTGG TCGTCTCCTC CGAGGACGAC GAGCCGGTCA CCATGTACCT GCGCAAGCAG
GGCCCCGGCG ACGTCACCGC CGCCGACATC GCCCCGCCCG CCGGCGTGAC CGTGCATAAC
TCGGATCTGA AGCTGGCCAC CCTGACCAAG AAGGGCAAGC TGGAGATCGA GCTGGTCGTC
GAGCGTGGCC GCGGCTACGT CCCGGCCTCG CCGAACAAGG TCGTCGGCGC CGAGATCGGC
CGCATCCCGG TCGACTCGAT CTACTCGCCG GTGCTGAAGG TCACCTACCG GGTCGAGGCC
ACCCGCGTCG AGCAGCGCAC CGACTTCGAC AAGCTGGTGC TGGACGTCGA GACCAAGCCG
TCGATCACCC CGCGGGACGC GCTGGCCTCG GCCGGCACCA CCCTGGTGGA GCTGTTCGGG
CTGGCCCGCG AGCTCAACGT CGACGCGGAA GGCATCGAGA TCGGGCCGTC GCCCGCCGAG
GCCGACCACA TCGCCGCGTT CGGGCTGCCG ATCGAGGAGA TGGACCTGAC CGTCCGCTCC
TACAACTGCC TCAAGCGCGA GGGCATCCAC ACCGTCGGCG AACTGGTCTC CCGGACCGAG
GCCGACCTGC TGGACATCCG CAACTTCGGG CAGAAGTCGA TCGACGAGGT CAAGATCAAG
CTCGCCGGCA TGGGCCTGGC CCTGAAGGAC TCGCCGGCCG GGTTCGATCC CGCCGCCGCC
GCGCTGTCCT ACGGCGACAC CGACTGGAAC GACGACACCG ACGACAGCGG CTACGGCTCG
CTGGCCGGCC TCGGTGGCAC GCCCCAGGAC GACACCGACT ACGCCGAGAC CGAGCAGATC
TGA
 
Protein sequence
MLISQRPSLT EEPVADNRSR FIIEPLEPGF GYTLGNSLRR TLLSSIPGAS VTSIRVDGVL 
HEFTTVPGVK EDITELILNL KELVVSSEDD EPVTMYLRKQ GPGDVTAADI APPAGVTVHN
SDLKLATLTK KGKLEIELVV ERGRGYVPAS PNKVVGAEIG RIPVDSIYSP VLKVTYRVEA
TRVEQRTDFD KLVLDVETKP SITPRDALAS AGTTLVELFG LARELNVDAE GIEIGPSPAE
ADHIAAFGLP IEEMDLTVRS YNCLKREGIH TVGELVSRTE ADLLDIRNFG QKSIDEVKIK
LAGMGLALKD SPAGFDPAAA ALSYGDTDWN DDTDDSGYGS LAGLGGTPQD DTDYAETEQI