Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1172 |
Symbol | |
ID | 8446768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1288049 |
End bp | 1289131 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645040309 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_003200568 |
Protein GI | 258651412 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.559989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCT CCCAGCGCCC CAGCTTGACC GAGGAGCCGG TGGCCGACAA CCGGTCCCGC TTCATCATCG AGCCGCTCGA GCCCGGATTC GGGTACACCC TGGGCAACTC CCTGCGGCGC ACCCTGCTGT CCTCCATCCC CGGCGCGAGC GTCACCAGCA TCCGCGTCGA CGGCGTGCTG CACGAGTTCA CCACCGTGCC CGGCGTCAAG GAGGACATCA CCGAGCTGAT CCTGAACCTC AAGGAACTGG TCGTCTCCTC CGAGGACGAC GAGCCGGTCA CCATGTACCT GCGCAAGCAG GGCCCCGGCG ACGTCACCGC CGCCGACATC GCCCCGCCCG CCGGCGTGAC CGTGCATAAC TCGGATCTGA AGCTGGCCAC CCTGACCAAG AAGGGCAAGC TGGAGATCGA GCTGGTCGTC GAGCGTGGCC GCGGCTACGT CCCGGCCTCG CCGAACAAGG TCGTCGGCGC CGAGATCGGC CGCATCCCGG TCGACTCGAT CTACTCGCCG GTGCTGAAGG TCACCTACCG GGTCGAGGCC ACCCGCGTCG AGCAGCGCAC CGACTTCGAC AAGCTGGTGC TGGACGTCGA GACCAAGCCG TCGATCACCC CGCGGGACGC GCTGGCCTCG GCCGGCACCA CCCTGGTGGA GCTGTTCGGG CTGGCCCGCG AGCTCAACGT CGACGCGGAA GGCATCGAGA TCGGGCCGTC GCCCGCCGAG GCCGACCACA TCGCCGCGTT CGGGCTGCCG ATCGAGGAGA TGGACCTGAC CGTCCGCTCC TACAACTGCC TCAAGCGCGA GGGCATCCAC ACCGTCGGCG AACTGGTCTC CCGGACCGAG GCCGACCTGC TGGACATCCG CAACTTCGGG CAGAAGTCGA TCGACGAGGT CAAGATCAAG CTCGCCGGCA TGGGCCTGGC CCTGAAGGAC TCGCCGGCCG GGTTCGATCC CGCCGCCGCC GCGCTGTCCT ACGGCGACAC CGACTGGAAC GACGACACCG ACGACAGCGG CTACGGCTCG CTGGCCGGCC TCGGTGGCAC GCCCCAGGAC GACACCGACT ACGCCGAGAC CGAGCAGATC TGA
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Protein sequence | MLISQRPSLT EEPVADNRSR FIIEPLEPGF GYTLGNSLRR TLLSSIPGAS VTSIRVDGVL HEFTTVPGVK EDITELILNL KELVVSSEDD EPVTMYLRKQ GPGDVTAADI APPAGVTVHN SDLKLATLTK KGKLEIELVV ERGRGYVPAS PNKVVGAEIG RIPVDSIYSP VLKVTYRVEA TRVEQRTDFD KLVLDVETKP SITPRDALAS AGTTLVELFG LARELNVDAE GIEIGPSPAE ADHIAAFGLP IEEMDLTVRS YNCLKREGIH TVGELVSRTE ADLLDIRNFG QKSIDEVKIK LAGMGLALKD SPAGFDPAAA ALSYGDTDWN DDTDDSGYGS LAGLGGTPQD DTDYAETEQI
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