Gene Namu_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1123 
Symbol 
ID8446719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1251271 
End bp1251933 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content70% 
IMG OID645040260 
Productribosomal protein L3 
Protein accessionYP_003200519 
Protein GI258651363 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAG CGATCAAGGG AATCCTGGGC CACAAGCTCG GGATGACCCA GGTCTTCGAC 
GAGGCCAACC GCGTGGTTCC GGTCACCGTC GTCGCGGCCG GCCCGGTCGT GGTCACCGCC
GTGCGCACCC CGGAGACCGA CGGCTACAGC GCGGTTCAGT TCGCGTTCGG CGCCGTCGAC
CCCCGCAAGG TGAACAAGCC GGCGGCCGGC CAGTTCGTCA AGGCCGGGGT CACCCCGCGC
CGGCATCTGG TCGAGCTGCG CACCGACGAT GTCTCGGGTT ACAGCGTGGG CCAGGAGCTC
ACCGCCGCCG AGGTCTTCGA CGCCGGCGCG GTGGTCGATG TGACCGGCAC GAGCAAGGGC
AAGGGCACCG CGGGTGTGAT GAAGCGGCAC GGCTTCGCCG GCCTGGGCGC CGGTCACGGC
GTGCAGCGCA AGCACCGTTC GCCGGGCTCC ATCGGCGGCT GCTCCACCCC GGGTCGGGTG
TTCAAGGGCC TGCGCATGGC GGGCCGGATG GGCAACGCCA AGGTGACCGT GCAGAACCTG
ACCGTGCACG CGGTCGACGC CGACCGCGGC CTGGTCCTGA TCAACGGGGC GGTGCCCGGT
CCCAAGGGCG GCCTCGTGAT GATCAAGTCC GCCGTCAAGA ACCAGAGCAA GGTGGGTGTC
TGA
 
Protein sequence
MAEAIKGILG HKLGMTQVFD EANRVVPVTV VAAGPVVVTA VRTPETDGYS AVQFAFGAVD 
PRKVNKPAAG QFVKAGVTPR RHLVELRTDD VSGYSVGQEL TAAEVFDAGA VVDVTGTSKG
KGTAGVMKRH GFAGLGAGHG VQRKHRSPGS IGGCSTPGRV FKGLRMAGRM GNAKVTVQNL
TVHAVDADRG LVLINGAVPG PKGGLVMIKS AVKNQSKVGV