| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1112 |
|---|
| Symbol | |
|---|
| ID | 8446708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 1241643 |
|---|
| End bp | 1242311 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645040249 |
|---|
| Product | 3-oxoacid CoA-transferase, B subunit |
|---|
| Protein accession | YP_003200508 |
|---|
| Protein GI | 258651352 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
|---|
| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGT CGACGACCCC ACCGGGCCCG CCGATGCGGG ACACCCCGTT GTCCCGTGCC
GAGCTGGCCG CCGCCGTCGC TCGGGACATC CCGCGGGGCG CCGTGGTCAA CCTGGGCATC
GGGTTGCCGA CCACCGTCTC GGACCACCTG CCCCCCGAGC GCGGCGTCAT CCTGCACACC
GAGAACGGGA TGCTGGGCAT GGGGCCCGCC GCAACTGGCG ACCAGATCGA CCCCGACCTG
GTCAACGCGG GCAAGATCCC GGTCACCGAG CGGCCCGGGG CGGCCTACTT CGACCAGGCG
GCGTCCTTCG CGATCATGCG CGGCGGTCAC CTGGACATCT GTGTGCTGGA CGCCTTCCAG
GTCTCGGGTC GCGGCGATCT GGCCAACTGG CACACCGGCG AACCGGACGC CATCCCCGCC
GTCGGCGGCG CGATGGACCT GGCCAACGGG GCCAAGGACG TGTTCGTGAT GATGTCGCTG
TTCACCAGGG ACGGCCGGCC CAAGCTCGTC CCCGAATGCA CCTATCCGCT CACCGGACTC
GGCTGCGTCA GCCGCGTCTA CACCGACCAC GCCGTCTTCC TGATCAGCGC GGACGGCGTT
CGGGTCCGCG AGACCTACGG CATCTCGATC GATGAGCTCC GGTCGCGACT GGCGGTCGCG
ATCAGCTGA
|
|---|
| Protein sequence | MSASTTPPGP PMRDTPLSRA ELAAAVARDI PRGAVVNLGI GLPTTVSDHL PPERGVILHT
ENGMLGMGPA ATGDQIDPDL VNAGKIPVTE RPGAAYFDQA ASFAIMRGGH LDICVLDAFQ
VSGRGDLANW HTGEPDAIPA VGGAMDLANG AKDVFVMMSL FTRDGRPKLV PECTYPLTGL
GCVSRVYTDH AVFLISADGV RVRETYGISI DELRSRLAVA IS
|
|---|
| |