| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1063 |
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| Symbol | rpoB |
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| ID | 8446659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1176615 |
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| End bp | 1180064 |
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| Gene Length | 3450 bp |
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| Protein Length | 1149 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645040201 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_003200460 |
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| Protein GI | 258651304 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.613328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.794281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAGTCA CCAGCACGTC CAGGTCCACC GCAAGCAGCC CCAACCGGGT CTCCTTCGCC
AAGCTCCGCG AACCACTGGA AGTACCCAAT CTCCTCGCTC TGCAGACCGA CTCGTTCGCC
TGGCTCGTCG GCGGCGCCGA CTGGCGTGCC CGCCAGGACG AGCCGACGCC CAGCGGGCTC
GACGAGATCC TGGAGGAGAT CTCCCCGATC GAGGACTTCT CCGGCAACCT GTCGCTGTCC
TTCTCCGACC CGCGCTTCGA CGAGGTCAAG GCGAACGAGG AGGAGTGCCG GGACAAGGAC
ATGACCTACT CGGCCCCGCT GTTCGTCACC GCCGAGTTCA TGAACGGCGA GACCGGCGAG
ATCAAGTCGC AGACCGTCTT CATGGGTGAC TTCCCCATGA TGACCAGCAA GGGCACGTTC
ATCATCAACG GCACCGAGCG GGTCGTGGTG TCCCAGCTGG TGCGTTCGCC CGGCGTCTAC
TTCGACAAGT CGCTGGACAA GACCGCGGGT AAGGACGTCT TCAGCTGCAA GGTCATCCCC
TCGCGGGGTG CCTGGCTCGA GTTCGACGTG GACAAGCGCG ACACCATCGG TGTGCGCATC
GACCGCAAGC GGCGGCAGCC GGTCTCCGTG CTGCTCAAGG CGCTGGGCTG GGACACCGAG
CGGATCCGGG AGCACTTCTC CTGGTCGCCG GTGCTGCTGG CGACCCTGGA GAAGGACCAC
ATCGCCGGCC AGGACGAGGC GCTGCTGGAC ATCTACCGCA AGCTGCGTCC GGGCGAGCCG
CCGACCAAGG AGAGCGCGCA GGCCCTGCTG GACAACCTGT TCTTCAAGGA CAAGCGCTAC
GACCTGGCCA AGGTCGGCCG GTACAAGATG AACAAGAAGC TGGGCGTCAA TCAGCCGACC
AGCGTGGGCA CCCTCACCGA GGACGACCTG CTCTCGATCG TCGAGTACCT GCTGCGCCTG
CACCAGGGCG ATGCCGAGTG GACCAAGAAC GGTCGGGTCT ACCCGGTCGA GACCGACGAC
ATCGACCACT TCGGCAACCG CCGGCTGCGC ACCGTGGGTG AGCTGATCCA GAACCAGATC
CGGGTCGGCC TGTCCCGCAT GGAGCGCGTC GTCCGGGAGC GGATGACCAC TCAGGACGTC
GAGGCGATCA CGCCGCAGAC CCTGATCAAC ATCCGGCCGG TCGTCGCCTC CATCAAGGAG
TTCTTCGGCA CCAGCCAGCT CTCGCAGTTC ATGGACCAGA CCAACCCGCT CGCGGGCCTG
ACCCACAAGC GGCGGCTGTC CGCGCTGGGT CCGGGCGGTC TGTCCCGGGA TCGCGCCTCG
CTCGAGGTCC GCGACGTGCA CCCGTCCCAC TACGGCCGGA TGTGCCCGAT CGAGACCCCG
GAAGGCCCGA ACATCGGCCT CATCGGCTCG CTGTCGACCT TCGCCCGGGT GAACCCGTTC
GGCTTCATCG AGACGCCGTA CCGCAAGGTG ATCGACGGCG TCGCGACGGA TCAGATCGAG
TACCTGACCG CCGACGAGGA GGACCGGTTC ATCATCGCCC AGGCCAGCGC CAAGCTGGAC
AACGACGGGC GGTTCACCGA GAACCGGGTG CTGGTCCGGC GGAAGGGCTC CGGCGAGGTC
GACCAGGTCC CGCCGGCCGA GGTCGAGTAC ATGGACGTCT CGCCGCGGCA GACCGTCTCG
GTCGCGACCG CGATGATCCC GTTCCTGGAG CACGACGAGG CCAACCGGGC CCTGATGGGC
GCCAACATGC AGCGGCAGTC CGTGCCGTTG CTGCGCTCGG AGGCGCCGCT GGTCGGCACC
GGCATGGAGG CCCGCGCGGC CAAGGACGCC GGCGACGTGC TCATCGCCGA GAAGTCGGGT
GTGGTCGAAG AGGCCACCGC CGACTACATC TCGGTGATGA ACGACGACGG CACCCACCGC
ACCTACCGGC TGAACAAGTT CCGCCGGTCG AACCAGGGCA CCAGCTTCAA CCAGAAGCCG
ATCGTGGATG AAGGGGCGAG GGTCGAAGCC GGCGACGTCA TCGCCGACGG GCCGTGCACC
GACGGCGGCG AGATGGCGCT GGGCAAGAAC CTGCTCGTCG CCTTCATGCC GTGGGAGGGC
CACAACTACG AGGACGCGAT CATCCTGTCC CAGCGCATCG TCCAGGACGA TGTGCTGACC
TCGATCCACA TCGAGGAGCA CGAGATCGAT GCCCGCGACA CCAAGCTGGG CCCTGAGGAG
ATCACCCGGG ACATCCCGAA CGTCTCCGAG GAGGTGCTGG CCGACCTCGA CGAGCGCGGC
ATCGTCCGCG TCGGCGCCGA GGTGCAGGAC GGCGACATCC TGGTCGGCAA GGTCACGCCC
AAGGGCGAGA CCGAGCTGAC CCCGGAGGAG CGGCTGCTGC GCGCGATCTT CGGCGAGAAG
GCGCGTGAGG TCCGCGACAC CTCGCTGAAG GTGCCGCACG GCGAGACCGG CAAGGTCATC
GGCATCCGGG TGTTCAACCG GGACGACGAC GGCGCCGAGC TGCCCCCGGG CGTCAACGAG
CTGGTCCGGG TGTACGTGGC CCAGAAGCGC AAGATCCAGG ACGGCGACAA GCTGGCCGGA
CGCCACGGCA ACAAGGGCGT CATCGGCAAG ATCCTGCCCG TCGAGGACAT GCCCTTCCTG
CCCGACGGCA CCCCGGTCGA CATCGTGCTC AACCCGCACG GTGTGCCTCG ACGGATGAAC
ATCGGTCAGA TCCTGGAGAC CCACCTCGGG TGGGTGGCCT CCCAGGGCTG GCAGGTCGAG
GGCGAGCCGG GCTGGGCCAA GAACCTGTCC GAGCAGACCC GGGAGGCCGG GCCGTGGACC
AAGACCGCCA CGCCGGTGTT CTCCGGGGCC TCCGAGGACG AGATCATGGG CCTGCTCGGT
TCGACGACCC CGACCCGGGA CGGCGAACGC CTGGTTCACA CCGATGGCAA GGCGACCCTG
TTCGACGGAC GCACCGGCGA GCCGTTCCCG TACCCGGTCG CGGTCGGCTA CATGTACATC
ATCAAGCTGC TGCACCTGGT CGACGACAAG ATCCACGCCC GTTCGACCGG TCCGTACTCG
ATGATCACGC AGCAGCCGCT GGGTGGTAAG GCGCAGTTCG GTGGGCAGCG CTTCGGTGAG
ATGGAGTGCT GGGCGATGCA GGCCTACGGG GCTGCGTACA CCCTGCAGGA ACTGCTCACC
ATCAAGTCCG ACGACATCGT GGGCCGGGTC AAGGTCTACG AGGCCATCGT CAAGGGCGAG
AACATCCCCG AGCCGGGAAT CCCGGAGTCG TTCAAGGTGT TGCTCAAGGA GCTTCAGGCC
CTGTGCCTGA ACGTCGAGGT GCTCTCCAGC GATGGCGTCG CGATCGAGAT GCGTGATTCT
GACGATGACG ATCTCGAGCG CGCCGCGGCC AACCTCGGAA TCAACCTGTC GCGCAACGAG
TCGGCCTCGG TCGACGACTT GGTGAACTAA
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| Protein sequence | MAVTSTSRST ASSPNRVSFA KLREPLEVPN LLALQTDSFA WLVGGADWRA RQDEPTPSGL
DEILEEISPI EDFSGNLSLS FSDPRFDEVK ANEEECRDKD MTYSAPLFVT AEFMNGETGE
IKSQTVFMGD FPMMTSKGTF IINGTERVVV SQLVRSPGVY FDKSLDKTAG KDVFSCKVIP
SRGAWLEFDV DKRDTIGVRI DRKRRQPVSV LLKALGWDTE RIREHFSWSP VLLATLEKDH
IAGQDEALLD IYRKLRPGEP PTKESAQALL DNLFFKDKRY DLAKVGRYKM NKKLGVNQPT
SVGTLTEDDL LSIVEYLLRL HQGDAEWTKN GRVYPVETDD IDHFGNRRLR TVGELIQNQI
RVGLSRMERV VRERMTTQDV EAITPQTLIN IRPVVASIKE FFGTSQLSQF MDQTNPLAGL
THKRRLSALG PGGLSRDRAS LEVRDVHPSH YGRMCPIETP EGPNIGLIGS LSTFARVNPF
GFIETPYRKV IDGVATDQIE YLTADEEDRF IIAQASAKLD NDGRFTENRV LVRRKGSGEV
DQVPPAEVEY MDVSPRQTVS VATAMIPFLE HDEANRALMG ANMQRQSVPL LRSEAPLVGT
GMEARAAKDA GDVLIAEKSG VVEEATADYI SVMNDDGTHR TYRLNKFRRS NQGTSFNQKP
IVDEGARVEA GDVIADGPCT DGGEMALGKN LLVAFMPWEG HNYEDAIILS QRIVQDDVLT
SIHIEEHEID ARDTKLGPEE ITRDIPNVSE EVLADLDERG IVRVGAEVQD GDILVGKVTP
KGETELTPEE RLLRAIFGEK AREVRDTSLK VPHGETGKVI GIRVFNRDDD GAELPPGVNE
LVRVYVAQKR KIQDGDKLAG RHGNKGVIGK ILPVEDMPFL PDGTPVDIVL NPHGVPRRMN
IGQILETHLG WVASQGWQVE GEPGWAKNLS EQTREAGPWT KTATPVFSGA SEDEIMGLLG
STTPTRDGER LVHTDGKATL FDGRTGEPFP YPVAVGYMYI IKLLHLVDDK IHARSTGPYS
MITQQPLGGK AQFGGQRFGE MECWAMQAYG AAYTLQELLT IKSDDIVGRV KVYEAIVKGE
NIPEPGIPES FKVLLKELQA LCLNVEVLSS DGVAIEMRDS DDDDLERAAA NLGINLSRNE
SASVDDLVN
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