| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1051 |
|---|
| Symbol | |
|---|
| ID | 8446647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 1161125 |
|---|
| End bp | 1162909 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645040189 |
|---|
| Product | Rhs element Vgr protein |
|---|
| Protein accession | YP_003200448 |
|---|
| Protein GI | 258651292 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGG CCCATCCCCT GTCCATCAAC CGAACGGCCC CGGTGCTGCA GGTCAACGGG
GCGCCGCTGG CGGCGAGCGC GCTGGCCGCG TTGATGGAGC TGCGCATCAC CCGGGGCCTG
CGCTTGCCCG GTCGGGCCAC GCTGCGCTTC GACGATGCCG GCCACGCCCT GGCCGCCGGC
GGCACTTTCG CCATCGGCGC CACCGTCTCG GTCGCCGCCG GCTCCGGGCA GGTGCTGCTC
TCCGGTGAGG TCACCGGGGT CGACCTGAGT ATCGAGTACG GGCAGCCCGA GTTCACCGTC
GTCGTCGACG ACCTGTCCTA CAAGCTCACC CTGGGCGCCA AGATCCGCAC GTTCGCCGCC
ATCACCTACG GCGAGGTGAT CGGCCAGATC TGCCGGGAGC AGGGCCTGAG CTTCGAGAAC
CGCGGCGGCA CCGACGCGTT GACCGTGCAG CAGGACTACC TGATGCAGTC CGACACCGAC
TTCGGCTTCC TGACCGAGAT CGCCGACCGG ACCGGCAACG ACTGGTGGGT GGAGGAATCG
ACGCTGGTGC TGGCGGCGCC GACGGACGCG CAGCCGGTCG CCTCCCTCGG CTTCGGCGAC
GACCCGACGC TGACCGCGTT CACCGTCCGG GCCAGCGCCC TGCACCCGGC CGAGCCGGTG
GTGCACGGCT GGTGGCCGCA GACTAAGCAG GCGGTCACCG CGCAGGGGCG GGCGGCCAGC
ACGTCCAGCG TGCCGACGCT GGTCGAGCCG TTCATCCAGG CCAGCGACCT TTCCAGCCGG
GCCAAGACGG TGACGGCCAG CGAGGTGCCG CTGGACCAGT CCGACGCGGA GGTGCTGGCC
AACCGGCTGG CCGGCCGCTG GAGCTCGGGG GCGGTGACCG CCCGCGGCAC CACGGTGCAG
GTCGAACCAG CCGTGGTGCC GGGATCCACG GTGGCGGTGA CCGGTTCGGG TCCGGCGTCG
GGCAATTACC ACGTCACCGA GATCGAACAC GTCTACAACC GCCGGGGTTT CAGCACCCGC
TTCACCGCCG GCGACCGCCG GCCGTCCTCC CTGGTCGACG CGCTGTCCAC CCAGGCCTCG
TCGAGCTTTC GCCGGCAGGG CATCGTCATC GGGGTGGTCA CCAAGGTCGG CAACCCGAAC
GGCTCCCCCG GCGAGGTCAA GGTCGCCTAC AAGTCGGCCG GGGACCAGGT CGAGTCGAAC
TGGGCCCGGG TGGTCACCGT GGGCGCCGGC AACGGCCGGG GCGCGACGTT CATCCCGGAG
ATCAACGACG AGGTGATCGT CGGGTTCGAG GGCGGCGACA GCCGCCGGCC GATCGTGCTC
GGCGGCGTGT ACAACGGTCA GGACGTGCCG GTGGAGTTCG GGGTGGCCAA CAGCAAGGTC
AACAAGCGCC GGATCACCTC CCGGGCCGGG CATTTCCTGG AGTTCGGGGA CGGCGACGCG
ACCGCCGACC AGCACATCAG CTTCACCCTG GCCGGCGCGG AGCACCAGAT CGTGCTGGGC
AAGGAGAAGT TCGAGGCGAC GGTGCCCTCG GGCAAACCGA TGACGATCAA GTCCGGCAAC
TCCAGCATCG CCATCGGCGC CGACGGATCG ATCACCATCC AAGGCAAGAA GATCACCCTC
AAGGCCGACA CCGACGTCGA GATCTCCGGG GTCAACGTGA CCACCAAGGC CAGCGTGAAG
GCCGAGACCT CGGCGACCCA GGTCGCGATC AAGGCCTCGG CCACCGGCGA GGTCTCCTCC
GGCGGCATGA TGTCGGTCAA GGGCGCCATG GTGGCGGTGA ACTGA
|
|---|
| Protein sequence | MTMAHPLSIN RTAPVLQVNG APLAASALAA LMELRITRGL RLPGRATLRF DDAGHALAAG
GTFAIGATVS VAAGSGQVLL SGEVTGVDLS IEYGQPEFTV VVDDLSYKLT LGAKIRTFAA
ITYGEVIGQI CREQGLSFEN RGGTDALTVQ QDYLMQSDTD FGFLTEIADR TGNDWWVEES
TLVLAAPTDA QPVASLGFGD DPTLTAFTVR ASALHPAEPV VHGWWPQTKQ AVTAQGRAAS
TSSVPTLVEP FIQASDLSSR AKTVTASEVP LDQSDAEVLA NRLAGRWSSG AVTARGTTVQ
VEPAVVPGST VAVTGSGPAS GNYHVTEIEH VYNRRGFSTR FTAGDRRPSS LVDALSTQAS
SSFRRQGIVI GVVTKVGNPN GSPGEVKVAY KSAGDQVESN WARVVTVGAG NGRGATFIPE
INDEVIVGFE GGDSRRPIVL GGVYNGQDVP VEFGVANSKV NKRRITSRAG HFLEFGDGDA
TADQHISFTL AGAEHQIVLG KEKFEATVPS GKPMTIKSGN SSIAIGADGS ITIQGKKITL
KADTDVEISG VNVTTKASVK AETSATQVAI KASATGEVSS GGMMSVKGAM VAVN
|
|---|
| |