| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1028 |
|---|
| Symbol | tdh |
|---|
| ID | 8446624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1135316 |
|---|
| End bp | 1136359 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645040167 |
|---|
| Product | L-threonine 3-dehydrogenase |
|---|
| Protein accession | YP_003200426 |
|---|
| Protein GI | 258651270 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCAC TGTTCAAAGC CGAACGGGCT CCCGGGTTCG AGCTGACCGA GCGCCCCGAC
CCCACCTGCG GCCCCACCGA CGTCATCGTC CGGGTGCTGC GCACCGGTAT CTGCGGCACC
GACCTGCACA TCCAGCGCTG GGATGCCTGG GCCGACTCGA TCGTCCGGGC CCCCCTGATC
CCGGGTCACG AGTTCTTCGG CGAGGTCGTC GAGATCGGTT CCGGTGTGCG CGATGTCGCC
GTCGGGGACC GGGTCTCGGG CGAGGGTCAC ATCGTCTGCG GCACTTGCCG CAACTGCCGG
GCCGGGCGCG GGCACATGTG CATCCGCACG ATCAGCGTCG GCGTCCAGCG CGATGGCGCG
TTCGCCGAGT ACGTGGCCAT CCCGGCCGGC AACGTCTGGG TGCATCATCA CCACATCGAC
CCCGACCTGG GTGCGATCTT CGATCCCTTC GGCAACGCCG TGCACACCGC GCTGTCCTTC
CCGCTGGTCG GCGAGGACGT GCTGGTCAGC GGCTGCGGCC CGATCGGGCT GATGGCCATC
GCCGTCGCCC GGCATGCCGG GGCGCGGTTC GTGGTCGGCA CCGACGTCAG CGCCGCGCGG
CTGGACCTGG CCCGCAAGAT GGGCGCGAAC GAGGTGGTCG ACGTTGCCCA CCAACCGATC
TCGGATGCGC AGCGGTCGCT GGGCATGCGC GAGGGTTTCG ACGTCGGCTT CGAGATGAGC
GGGGCGCCGG CCGCGCTGCA GTCGATGATC GAGAACCTCA ACCACGGTGG CCGGGTGGCC
ATCCTCGGCC TGCCCGCCCA GCCGTTCGCG ATCGACTGGG GCAAGGTCGT CACGCACATG
CTCACCCTCA AGGGCGTCTA CGGGCGCGAG ATGTACGAGA CGTGGAACGC CATGGGCGCC
ATGATCCAGT CCAGCCCGGC CCTGCGGGAG GCGATCACCT CGGTGATCAC CCACCGCCTC
CCGGCCCGCG ACTGGGAGCA GGGATTCGCC GCCGCGGCCG CGGCCGGCAC CGGCAAGATC
GTCCTCGACT GGTCGGAGGT CTGA
|
|---|
| Protein sequence | MKALFKAERA PGFELTERPD PTCGPTDVIV RVLRTGICGT DLHIQRWDAW ADSIVRAPLI
PGHEFFGEVV EIGSGVRDVA VGDRVSGEGH IVCGTCRNCR AGRGHMCIRT ISVGVQRDGA
FAEYVAIPAG NVWVHHHHID PDLGAIFDPF GNAVHTALSF PLVGEDVLVS GCGPIGLMAI
AVARHAGARF VVGTDVSAAR LDLARKMGAN EVVDVAHQPI SDAQRSLGMR EGFDVGFEMS
GAPAALQSMI ENLNHGGRVA ILGLPAQPFA IDWGKVVTHM LTLKGVYGRE MYETWNAMGA
MIQSSPALRE AITSVITHRL PARDWEQGFA AAAAAGTGKI VLDWSEV
|
|---|
| |