Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1007 |
Symbol | |
ID | 8446600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1104820 |
End bp | 1107381 |
Gene Length | 2562 bp |
Protein Length | 853 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645040143 |
Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
Protein accession | YP_003200405 |
Protein GI | 258651249 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAAAG CCCTTCACCC GACCGCCCGG TCCCGGCGGA CGTTCTCGGC CCGCCAGGTG TTCCCGGTGG TCGCCACGGT GATGTTCCTG CTGGCCGGAG CCCTCTGGGT GCCGGTCCTG CGGCTGTCGG CCAACCTGGT CGATCCCGAG TACCTGCTGC TGGGCATGCT GGTCCTGCTG GTGGCGTTCC TGGCCGGCGA ACTGTTCCCC CTGCACATCG AGGTCCGCCG GGAAACGTTG CTGGTCAGCG GATCCGAACT GCCGATGGTC TTGGGGCTGT TGCTGTTGCC GGCCTGGACG GTCGGGCTGA CCCACCTGGT GGCCAGCGGA CTGGTCTTTT TGTTCCGGCG GGACAGCTCC CGCAACATCG CGGTCAACCT GTCGTTCATC GCCGCCGAGA CCGGCGCCGC GGCCCTGATC ATGTTGCTGA TCACCCGAGC CGCCCCGGCC CCGCCGGTCG GCGTGCAGTA CCTGGCGGTC TCGGTCGGCG TGCTGACCGG GGCACTGCTG TCGGCGATCG CCGTCGGGCT GACCTACCGG CTGCTCGGTC CGGCCGAACC GCTGGGCCGG ATCATCGTCC GGTCGATGAT CTCGGCATTG GCCATCGTGA CGTTCGCGCT GGTCGGCTAC ACCGTGTGGA TGGCCGGTCC GTTCGGGCCG TGGCTGTGCG TGGCCCTGGC CGGGGTCCTG GCCGTGCTCT ACCGGACCTA CTTCGTCTTC CTGCGCCAGC ACGCCGACCT GACCCGGATG TACAGCTTCG TCCGCGAGGT CGGTGCGGTG GGCGCCGCGG CCGACGGGTG GCGGGGCGTG CTCGAGCAGG TGCGCGATCA GTTCAACGCC GAGGTGGCGG TGCTGCGCCT GGACGAGGGT GACGGCTCTC TGGCCGGTAT CGCCGTCGGC CCCGACGGGC CGCGCCCGGA GCGGACGCTG CCGGACACCG ACCCGCTGCT GGTGCAGGCC CGGTCCGAGG GTCGGGTCCG GGTCTCGACC GATCGGACCA TGGACACCCC GGTGCTCGCG GCCCTGGCCG AACGGCAGGC GTGGGACGTG CTCGTGGTGC CGCTGCGCTC GGGCGACCGG GACCGCGGTT ACCTGGAACT GCACGACCGG CTCAGCCGCT GGGACCGCTT CCGGGACGAG GACCTCCGGG TCCTGGAGAC GCTGGGCGGC CACGTCGCCA CCGCCCTGGA CAATCTGCGG CTGATGGATT CGTTGCGGCA CGAGGCCTAC CACGACGCCA TCACCGGCCT GCGCAACCGG GTCGGTCTCA CCGTCGCCGG CCAGGAGGCG ATGTCCGGCG GGGGCGGGGG CGCCATCCTG CTGGTCGAGC TCAATGTCCT GTCCCAGGTC AACAACGCCC TCGGGCACGA CCGCGGGGAG CTGCTGCTGC GGATGGCCGG CGAGCGGCTG GTCGCGCTGG TCGGACCGAC CCGCCCGGTC GCCCGGATCG AGGCCGATCG GTTCGCCGTG CTCTGCGAGC CGCTGCCCGA GACCGAGCTG ACCGCGCTGG GCGGGCAGAT GCTCTCCGCC GTCGGCGGCG GGTACTCGAT CGACGGCATC GAGATCGATC CCCAGGGGGC GGTCGGCATC GCCGTCGTCC CGGCCGGCGC GGCCGGTCAT GGCTCCGACA GCGGCCTGGA ACCCAGCGTG CTGCTGCAGC GGGCCGAGAT GGCCATGCTG GCGGCCAAGG TCCGGCAGGA GTCGGTGCAG ATCTACCGGC CCAGCATGGG GGAGGTCTAC CGGCGCCGGT TCCAGCTGGT CACCCAGTTC CGGCAAGCGG TCGAGCAGGG CCGGATCATC GTGCACTACC AGCCCAAGGT CGACCTGGCC CACCGGGAGC TGGTCGGCGT CGAGGCGTTG GTGCGCTGGA TGCATCCGGA ATTCGGGCTC GTCTCGCCGG CCGAGTTCGT CGAGGCGATC GAGGCCACCG GTTCGATCGA CATCCTGCTC GAGCACGTGC TGGACAGCGT GCTGGCCCAG CTGTGGCAGT GGCGCAGCGC TGGGCTGCAT ATCACCGCGT CGGTCAACCT GTCGGTGCAC AACCTGCTGG CCGAGAACTT CCCGGCCACC GTGGCCGCGG CCCTGCGCCG GCACCAGGTG CCGGCCCAGC TGCTCACCTT CGAGATCACC GAGTCGAACG TGATGACCGA CCCGGAACAC TCGCTGCCGG TCCTGCGCGA GCTGCACGCC ATGGGCATCC AGCTGTCGGT CGACGACTTC GGGACCGGCT ACTCCTCCCT GGCCTACCTG CGGCGACTGC CGATCGACGA GATCAAGATC GACCGCTCGT TCGTGCAGGG GATGGGCACC GACCTGTCGG ACCTGGCCAT CGTCCGGGCC ATCGTCGACC TGGGCCACTC GCTGGGCCTG CGGGTGGTCG CCGAGGGCGT GGAAGAGGAG GCGGCCCGGG ACGCGCTGCG CGAGATGGCC TGCGACGAGG CTCAGGGCTT CCTGATCTCC CGTCCGGTGC CGCTGGATCG GTTCGAGGCC TGGCTGGCCT CGCGCACGGT CAGCATCTAC GACCCGGCCT CGACCACCCA CGTGCTGCGG ATGATGAGTT GA
|
Protein sequence | MTKALHPTAR SRRTFSARQV FPVVATVMFL LAGALWVPVL RLSANLVDPE YLLLGMLVLL VAFLAGELFP LHIEVRRETL LVSGSELPMV LGLLLLPAWT VGLTHLVASG LVFLFRRDSS RNIAVNLSFI AAETGAAALI MLLITRAAPA PPVGVQYLAV SVGVLTGALL SAIAVGLTYR LLGPAEPLGR IIVRSMISAL AIVTFALVGY TVWMAGPFGP WLCVALAGVL AVLYRTYFVF LRQHADLTRM YSFVREVGAV GAAADGWRGV LEQVRDQFNA EVAVLRLDEG DGSLAGIAVG PDGPRPERTL PDTDPLLVQA RSEGRVRVST DRTMDTPVLA ALAERQAWDV LVVPLRSGDR DRGYLELHDR LSRWDRFRDE DLRVLETLGG HVATALDNLR LMDSLRHEAY HDAITGLRNR VGLTVAGQEA MSGGGGGAIL LVELNVLSQV NNALGHDRGE LLLRMAGERL VALVGPTRPV ARIEADRFAV LCEPLPETEL TALGGQMLSA VGGGYSIDGI EIDPQGAVGI AVVPAGAAGH GSDSGLEPSV LLQRAEMAML AAKVRQESVQ IYRPSMGEVY RRRFQLVTQF RQAVEQGRII VHYQPKVDLA HRELVGVEAL VRWMHPEFGL VSPAEFVEAI EATGSIDILL EHVLDSVLAQ LWQWRSAGLH ITASVNLSVH NLLAENFPAT VAAALRRHQV PAQLLTFEIT ESNVMTDPEH SLPVLRELHA MGIQLSVDDF GTGYSSLAYL RRLPIDEIKI DRSFVQGMGT DLSDLAIVRA IVDLGHSLGL RVVAEGVEEE AARDALREMA CDEAQGFLIS RPVPLDRFEA WLASRTVSIY DPASTTHVLR MMS
|
| |