Gene Namu_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0999 
Symbol 
ID8446591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1097134 
End bp1098456 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content70% 
IMG OID645040134 
Productisocitrate lyase 
Protein accessionYP_003200397 
Protein GI258651241 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CGTTGGATGC CACCGCCACC ACCGAGGGGC GCGCGGCGAA CCGGAACTCG 
GACCAGGCAG CCCTGCTGCG CCAGGAGTGG GCCGACGACG CCCGCTGGGC CGGCATCGAG
CGCTCCTACA CCGCCGAGGA CGTGATCCGG CTCCGCGGCA CCGTCCAGGA GGAGTACACG
CTGGCCCGTC GCGGGGCCGA GCGACTCTGG AACGCCTTGC AGACCAAGAA GTTCACCCGC
GCGTTGGGTG CGCTGACCGG CAACCAGGCC GTGCAGATGG TCAAGGGCGG CCTGGAGGCC
ATCTACCTGT CCGGGTGGCA GGTCGCCGCG GACGCCAACC TGTCCGGCCA GACCTACCCC
GACCAGAGCC TGTACCCGGC CAACTCGGTG CCCGCCGTGG TCCGCCGGAT CAACAACGCC
CTGCTGCGCG CCGACCAGAT CGACCACGCC GCCGGCAAGA CCGGCACCGA CTACCTGGTG
CCGATCGTCG CCGACGCCGA GGCCGGCTTC GGCGGCCCGC TCAACGCGTT CGAGCTGATG
AAGGGCATGA TCGCCAGCGG CGCCGCCGGG GTGCACTGGG AGGACCAGCT CGCCTCGGAG
AAGAAGTGCG GCCACATGGG CGGCAAGGTG CTGATCCCGA CCAGCCAGCA CTGCCGGACC
CTGAACGCCG CCCGGCTGGC CGCCGACACC TCCGGTGTGC CGAGCATCAT CGTCGCCCGC
ACCGACGCGC TGGCCGCCGA CCTGATCACC AGCGACGTCG ACCCGGTCGA CCAGCCGTTC
CTGACCGGCG AGCGCACCTC CGAAGGGTTC TACCGGGTCC GCAGCGGCCT GGAGCCGGTG
CTGGCCCGGG CCAAGCAGTA CGCCCGCTTC GCCGACCTGA TCTGGGTCGA GACCGGCACC
CCGGACCTGG GCCTGGCCCG CGAGTTCGCC ACGGAACTGC ACAAGGAGTT CCCGGGCAAG
CTGCTGGCCT ACAACTGCTC GCCGTCCTTT AACTGGCGCT CGAAGCTGTC CGACGCCGAG
ATCGCCACCT TCCAGGACGA GCTGGGCGAT CTGGGCTACG CCTTCCAGTT CATCACCCTG
GCCGGCTTCC ACGCCCTGAA CCACTCGATG TTCACCCTGG CCCAGGGCTA CGCCAAGACC
GGCATGAGCG CCTACGTGGA GCTGCAGGAG CGCGAGTTCG CCGACGAGGC CGTCGGGTAC
ACCGCGGTCA AGCACCAGGC CGAGGTCGGC ACCGGCTACT TCGACCAGGT CGCCACCGCC
CTCAACCCCG ACAGCGGCAC GCTGGCCCTG AAGGGGTCGA CCGAAGAAGA GCAGTTCCAC
TGA
 
Protein sequence
MTATLDATAT TEGRAANRNS DQAALLRQEW ADDARWAGIE RSYTAEDVIR LRGTVQEEYT 
LARRGAERLW NALQTKKFTR ALGALTGNQA VQMVKGGLEA IYLSGWQVAA DANLSGQTYP
DQSLYPANSV PAVVRRINNA LLRADQIDHA AGKTGTDYLV PIVADAEAGF GGPLNAFELM
KGMIASGAAG VHWEDQLASE KKCGHMGGKV LIPTSQHCRT LNAARLAADT SGVPSIIVAR
TDALAADLIT SDVDPVDQPF LTGERTSEGF YRVRSGLEPV LARAKQYARF ADLIWVETGT
PDLGLAREFA TELHKEFPGK LLAYNCSPSF NWRSKLSDAE IATFQDELGD LGYAFQFITL
AGFHALNHSM FTLAQGYAKT GMSAYVELQE REFADEAVGY TAVKHQAEVG TGYFDQVATA
LNPDSGTLAL KGSTEEEQFH