Gene Namu_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0969 
Symbol 
ID8446561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1062765 
End bp1063922 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content77% 
IMG OID645040104 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_003200367 
Protein GI258651211 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGGC CGCTGGCCGG CCTGCGGGTC GTCGAACTCG GCGGAATCGG GCCCGTCCCG 
CACGCCGGGA TGGTGCTGGC CGACCTCGGC GCCGACGTCG TGCGGATCCA ACGGCCCGGC
GGCGGGCTGG ACACCGGACC GCCGGACCGC GATGTGCTGC TGCGCGGTTG CCGGCTGCGG
TCGGCCGATC TGAGCACGCC CGCCGGGGTC GCCGATGTGC TGGCCGAGAT CGCCGCCGCC
GACGTGCTGG TGGAGGGTTT CCGGCCCGGA GTGGCCGAAC GGCTGGGCGT CGGGCCGGAG
GTCTGCCTGG CCCGCCGGCC GGAGCTGATC TATTGCCGGC TCACCGGCTG GGGCCAGGAC
GGGCCGTGGG CCGGCCGGGT CGGCCACGAC ATCAACTACC TGGCCCTGAC CGGCACCCTG
GACGCCCTGG GCGCGGCCGG CGGGCCCCCG CAGCTGCCGG CCAACCTGGT CGCCGACTTC
GGCGGCGGGT CGATGCTGGC CGTCGTCGGC ATCCTGGCCG CGCTGTACGA GCGAGCCCGA
TCCGGCCGCG GGCAGGTGAT CGACGCGGCC ATGGTCGACG GGGTGGAGCT GCTGTCCCAG
CTGATGTGGT CGATGCGCGG CCAAGGGTGG TGGCCGGGCG AGCGCGGCAC CAACCTGCTC
GACGGCGGCG CTCCGTTCTA CGCCGTCTAC CCGTGCGCGG ACGGGCGGTA CGTGGCCGTC
GGCGCGCTGG AGCCGCCGTT CTACGCCGCC CTGCTGGCCG GCTTGGGCCT GGCCGACGCG
GACCTGCCGG CCCAGCTCGA TCAGTCGGGC TGGCCGGGGC TGCGCCGGGC CATCGGGCAG
GCGTTCGCGT CCGCCCCGCG GGCCCACTGG CTCGGCGTGT TCGACGGCAC CGACGCCTGC
GTCACGCCGG TGCTGACCGC CGCCGAAGCG GCCCGGCACC CGCACCTGCT CGCCCGCGGC
ACCCTGGTCG AGGTCGACGG GATCGTCCAG GCCGCCCCGG CGCCCCGGTT CTCCCGGACC
CCCGCCGACC CGGTCCACCC GCCCGCATCC GACACCTCGC GCCCGGCGCT CGGCGACACC
CACCCGGCGC CACCCAGCCG GCGGGCTGAC CAACTCGGCG CGAAACCGGA CCAATCGGAC
CCGGTTTCGC CGAGTTGA
 
Protein sequence
MAGPLAGLRV VELGGIGPVP HAGMVLADLG ADVVRIQRPG GGLDTGPPDR DVLLRGCRLR 
SADLSTPAGV ADVLAEIAAA DVLVEGFRPG VAERLGVGPE VCLARRPELI YCRLTGWGQD
GPWAGRVGHD INYLALTGTL DALGAAGGPP QLPANLVADF GGGSMLAVVG ILAALYERAR
SGRGQVIDAA MVDGVELLSQ LMWSMRGQGW WPGERGTNLL DGGAPFYAVY PCADGRYVAV
GALEPPFYAA LLAGLGLADA DLPAQLDQSG WPGLRRAIGQ AFASAPRAHW LGVFDGTDAC
VTPVLTAAEA ARHPHLLARG TLVEVDGIVQ AAPAPRFSRT PADPVHPPAS DTSRPALGDT
HPAPPSRRAD QLGAKPDQSD PVSPS